Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq5629 156 1e-32 seq9766 138 3e-27 seq5914 138 3e-27 seq20961 132 1e-25 seq9986 107 6e-18 seq3042 104 7e-17 seq3043 91.5 4e-13 seq9767 89.7 2e-12 >seq5629 Length=49028 Score = 156 bits (172), Expect = 1e-32 Identities = 278/402 (69%), Gaps = 3/402 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 || |||||||| || || ||||| | || |||||||||| ||||| || || | Sbjct 26173 CCTGAAGAAATCTCCTCGATGGTCCTCACCAAGATGAAGGAAACCGCTGAGGCTTACCTT 26114 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || || || || | || || | || || || || || || || ||| |||| ||| Sbjct 26113 GGCACCACCGTCACCAACGCCGTCGTCACCGTCCCCGCTTACTTCAACGATTCCCAACGT 26054 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || | || |||| | || || || | || || || || Sbjct 26053 CAGGCTACCAAGGATGCCGGAACGATCTCGGGCATGAACGTCCTCCGTATCATCAACGAG 25994 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTAT 349770 ||||| || || || || || ||||| ||||| || | | || ||| || || | Sbjct 25993 CCCACCGCCGCTGCCATCGCCTATGGTCTTGACAAGAAG-GTCACCGGCGAGCGCAACGT 25935 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 ||||| || ||| | || || || ||||| ||||| || || | || | ||||| || Sbjct 25934 CCTTATCTTCGATCTTGGCGGAGGAACTTTCGATGTCTCCCTCTTGACCATCGAAGAAGG 25875 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 || || ||||| || || || ||||||||||| ||||||||||| |||||||| ||||| Sbjct 25874 TATCTTCGAAGTCAAGGCTACCGCTGGTGATACCCATCTTGGTGGTGAAGATTTCGATAA 25815 Query 349891 TCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC 349932 || |||||| || |||| | |||| || ||||| ||||| Sbjct 25814 CCGCCTCGTTAACCACTTTGCTCAAGAGTTCAAGCG-CAAGC 25774 >seq9766 Length=663 Score = 138 bits (152), Expect = 3e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||| ||||| | | || || |||||||| || ||||| ||||| || || ||||| Sbjct 376 CATACCTCCACGAAGACGAAGGACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAATC 435 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || ||||| || || || || || ||||| |||||||||||||| || Sbjct 436 CGAAAGAGTGCGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCGGG 495 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||| || || || || || || || || || || || ||||| || | || || | || Sbjct 496 AGGGATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTTATCGATGGTGTCCGACGACTC 555 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || | ||||| || || || || || || || |||||||| Sbjct 556 AACCTCAAGGGTGATGGTCTTGCCCGTGAGCGTCTTCACGAAGATCTGCAT 606 >seq5914 Length=27978 Score = 138 bits (152), Expect = 3e-27 Identities = 274/402 (68%), Gaps = 3/402 (1%) Strand=Plus/Minus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||||||||| || || ||||| | || |||||||||| ||||| || || | Sbjct 5276 CCCGAAGAAATCTCCTCGATGGTCCTCACCAAGATGAAGGAAACCGCTGAGGCGTACCTT 5217 Query 349592 GGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGT 349651 || || || || | || || | ||||| || ||||| || || || |||||||| Sbjct 5216 GGCACCACCGTCACCAACGCCGTCGTCACTGTCCCTGCCTACTTCAACGACTCCCAGCGT 5157 Query 349652 TCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAA 349711 || || || ||||| || | || | || | || || || | || || || || Sbjct 5156 CAGGCTACCAAGGATGCCGGAACGATCTCCGGAATGAACGTCCTCCGTATCATCAACGAG 5097 Query 349712 CCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA-GaaaaaaaTAT 349770 ||||| || || || || || || || ||||| || | | || || || || | Sbjct 5096 CCCACCGCCGCTGCCATCGCCTACGGTCTTGACAAGAAG-GTCACTGGCGAGCGCAACGT 5038 Query 349771 TCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGG 349830 ||| || || ||| | ||||| || || || ||||| || || | || | |||||||| Sbjct 5037 TCTCATCTTCGATCTCGGTGGAGGAACCTTCGATGTCTCCCTCTTGACCATCGAAGAGGG 4978 Query 349831 AATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAA 349890 || || ||||| || || ||||| ||||| || ||||||||||| |||||||| || || Sbjct 4977 TATCTTCGAAGTCAAGGCCACTGCCGGTGACACCCATCTTGGTGGTGAAGATTTCGACAA 4918 Query 349891 TCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC 349932 ||||| || || || | | | || || ||||| ||||| Sbjct 4917 CCGTCTTGTCAACCACTTCGCTCAGGAGTTCAAGCG-CAAGC 4877 Score = 100 bits (110), Expect = 9e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 349232 TGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGA 349291 ||||| | ||| |||||||| ||||||||||| || || || || ||||| ||||| | Sbjct 5690 TGTGTCGGTGTCTGGCAAAACGATCGTGTAGAGATCATCGCCAACGATCAGGGTAATCGC 5631 Query 349292 ACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAAA 349351 |||||||| ||||| || | || |||| || |||||| | || |||||| |||| || Sbjct 5630 ACAACGCCCTCATATGTATCCTTCTCCGACACGGAGCGTCTCATCGGTGATGCTGCTAAG 5571 Query 349352 AATCA 349356 ||||| Sbjct 5570 AATCA 5566 >seq20961 Length=332 Score = 132 bits (146), Expect = 1e-25 Identities = 141/186 (76%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 140506 ACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAAT 140565 ||| ||||||||| | | || ||||| |||||||| ||||| || ||||| || |||| Sbjct 147 ACAAACCACCACGGAGACGGAGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAAT 206 Query 140566 CAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 |||| | || | ||||| || || || || ||||||||||| | || ||||| || | Sbjct 207 CAGAAAGGGTCCTGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCGG 266 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 ||||||| ||||| || |||||||| || || || ||||| ||||||| || || | | Sbjct 267 GAGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTCACATTGTCAATCGTGTCCGAAGACT 326 Query 140686 CAACTT 140691 | |||| Sbjct 327 CGACTT 332 >seq9986 Length=5527 Score = 107 bits (118), Expect = 6e-18 Identities = 265/393 (67%), Gaps = 18/393 (5%) Strand=Plus/Minus Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 || ||| || || || || || ||| |||||||| ||| || || ||||||||| ||| Sbjct 672 TAGTGTCCCGGCTTACTTCAACGATTCCCAGCGTCTTGCTACCAAGGATGCTGGCGCCAT 613 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 || || | ||||||| | || || || || ||||| ||||| || ||||| || || Sbjct 612 CGCTGGACTTGATGTTCTCCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCTTACGG 553 Query 349738 GCTTGATAAAATGAGTGACCAAG----aaaaaaaTATTCTTATTTTTGATTTAGGTGGTG 349793 |||||| | | | ||||| | || || | || || || ||||| || || | Sbjct 552 TCTTGATCG--TCAAT--CCAAGGCGGAGAAGAACGTCCTCATCTTCGATTTGGGAGGAG 497 Query 349794 GTACTTTTGATGTATCACTACTAACACTTGAAGAG-GGAATTTTTGAAGTTAAAGCAACT 349852 | ||||| ||||| || || | | || | | | || | || | || || || ||| Sbjct 496 GAACTTTCGATGTTTCTCTGTTGA-ACATCACTGGTGGTGTCTTCGCCGTCAAGGCCACT 438 Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAAT---CGTCTCGTTTCGCATTTT 349909 |||||||| || ||| | ||||| |||||||| |||||| | ||||| ||| || Sbjct 437 GCTGGTGACACCCATTTGGGTGGTGAAGATTTCGATAATGCCCTTCTCG---AGCACTTC 381 Query 349910 GTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGAGATAATCCTAGAGCAATGCG 349968 || || || ||||| |||| | || | ||||| || || | | || | || Sbjct 380 AAGAACGAGTTCAAGCG-CAAGACCAAGCTCGATATCTCTGACGATGCCCGTGCCCTCCG 322 Query 349969 TCGCCTAAGAACTGCGTGTGAACGTGCTAAGCG 350001 ||| || || |||| ||||| ||||| ||||| Sbjct 321 TCGTCTGCGATCTGCTTGTGAGCGTGCCAAGCG 289 >seq3042 Length=1648 Score = 104 bits (114), Expect = 7e-17 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| |||||||| | | || ||||| ||||| || || || || ||||| |||| Sbjct 187 TTTGCATTCCACCACGAAGGCGGAGGACAAGGTGAAGGGTGGATTCCTTCTGAATGTTAT 246 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || ||||| |||||||| ||||| || ||||| | ||| || |||| Sbjct 247 AGTCGGAGAGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGAT 306 Query 140623 CAGGAGGAATTC 140634 |||||||||||| Sbjct 307 CAGGAGGAATTC 318 >seq3043 Length=305 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | | || || || ||||| ||||| || || || ||||| || Sbjct 50 CATTCCACCACGGAGACGCAAGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTC 109 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| |||||||| ||||| || ||||| | ||| || |||||||| Sbjct 110 GGAGAGGGTACGACCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCAGG 169 Query 140627 AGGAATTC 140634 |||||||| Sbjct 170 AGGAATTC 177 >seq9767 Length=446 Score = 89.7 bits (98), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562 ||| ||| ||||| || | | || ||||||||||| ||||| || || ||||| || | Sbjct 260 TTTGCATTCCACCGCGAAGGCGGAGGACAAGATGAAGGGTAGATTCCTTCTGAATGTTGT 201 Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622 | || || | || || || || || ||||| ||||| || ||||| || || || |||| Sbjct 200 AGTCGGACAGGGTGCGGCCGTCCTCGAGTTGCTTTCCGGCGAAGATAAGGCGCTGTTGAT 141 Query 140623 CAGGAGGAATTC 140634 | |||||||||| Sbjct 140 CGGGAGGAATTC 129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514731498018002