Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq9766 104 1e-17 seq3043 86.0 4e-12 >seq9766 Length=663 Score = 104 bits (114), Expect = 1e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | |||||| | || | ||| || ||| ||||||||| ||||| ||||| ||| Sbjct 380 CCTCCACGAAGACGAAGGACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAA 439 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || ||||||| || || || ||||| || || | ||| || || || || || Sbjct 440 AGAGTGCGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCGGGAGGG 499 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658 | |||||||||||| |||| || | || ||| || || ||||| ||| || Sbjct 500 ATACCCTCCTTGTCTTGGATC-TTCGCCTTGACGTTATCGATGGTGTCCGACGACTCAAC 558 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || | ||| || || || || || | ||| ||||| || ||||||||| Sbjct 559 CTCAAGGGTGATGGTCTTGCCCGTGAGCGTCTTCACGAAGATCTGCATG 607 >seq3043 Length=305 Score = 86.0 bits (94), Expect = 4e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| || | ||||||||| |||||| || |||||||| || || || || || Sbjct 63 AGACGCAAGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTACGA 122 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 | || |||||||| || ||||| || || ||||||||||| || || || Sbjct 123 CCATCCTCAAGTTGCTTTCCGGCGAAGATCAAACGCTGTTGATCAGGAGG 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314626287451622