Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_028656.1 Length=65955 Score E Sequences producing significant alignments: (Bits) Value seq20417 228 3e-55 >seq20417 Length=1235 Score = 228 bits (252), Expect = 3e-55 Identities = 401/574 (70%), Gaps = 10/574 (2%) Strand=Plus/Plus Query 65087 GCTTTGCGCTTGTTGCTCATGTCGTTACGGATCTGTGCATGACTCATTAACGCGAAGATA 65146 || ||| || |||||||||||| || ||||| |||||||| || || | |||||||||| Sbjct 667 GCCTTGTTCTGGTTGCTCATGTCATTGCGGATTTGTGCATGGCTAATGAGCGCGAAGATA 726 Query 65147 AAGGTGCCGCCGCAGATGTTCCCCGCTAAAGTAGGTAGTGCGAAGGGCCAGATGAAATCG 65206 | ||||||||| ||| ||||| || | || || || ||||||||||||||||| | | Sbjct 727 AGTGTGCCGCCGATGATATTCCCGGCGAGGGTCGGCAGGGCGAAGGGCCAGATGAACT-G 785 Query 65207 CT-CCAGTGCAGCGTACCGTTAAACACCAGATAGAGGATTTCAACAGAACCGACAACGAT 65265 || ||| | | | ||| |||||||||||||||||||||| || || ||||| || || Sbjct 786 CTGCCAAGGGATTGCGCCGGTAAACACCAGATAGAGGATTTCTACCGAGCCGACCACAAT 845 Query 65266 GTGAGTGGTGTCACCCAGGGCAATAAGCCAGGTCATCAATATAATCA-CCACAATCTTTG 65324 ||| || || | | ||| | || ||||||||| || |||| ||||| | |||| Sbjct 846 GTGCGTCAGATCGGCGATGGCCACCAGATAGGTCATCAGCATGATCACCCACACT-TTTG 904 Query 65325 CCGCACCCGCTGCAGGAAACATCCATACCATAGTGGCGATCAGCCAGCCGGAAATGATCG 65384 |||| ||||| | || | |||||| ||||| ||||| |||||||||||||| || || Sbjct 905 CCGCGCCCGCCGAGGGCAGCATCCACACCATGGTGGCAATCAGCCAGCCGGAGATAATGC 964 Query 65385 CGTTGGCAAACATCTCGCTGGGGGTGTTCTTCATCACATCCATGCCGATTTTGACAAATG 65444 || || | |||||| | | ||| |||||||| | |||| | ||| || ||| | Sbjct 965 CGCTGACGAACATCGCCGTCGGGTCTTTCTTCATGATCTCCAGACTGATGCTGCGAAAGG 1024 Query 65445 CATCGCGAGTTTCTTCATTGAAGATTGGCA-TATATTCAAATGCC--CACGCCGCAATAC 65501 | || || || | | ||| | |||| | || ||| ||| | || |||| Sbjct 1025 CCGCGTCGGTGTCGGCGTCGAAAAAAGGCACCAGATGGAAA-GCCAGCGCGGCGCAGGCG 1083 Query 65502 CTGTCCCGAGAATATTACCCAGCAGCACGACGCCCCATAACCGCATAAGTAAGCCAACGT 65561 | | || | | || || ||||| || ||| | || | || | | | || Sbjct 1084 CAG--CCAATCAGGTTGCCACCGAGCACCCAGCTCCACAGGCGTAGCAGCAGGGCGCTGT 1141 Query 65562 TGCTCATTGTCGGTTTTTGCATGACGGGTAGTACCGCAGTCACGGTGTTTTCGGTAAATA 65621 | ||| ||| | || ||||| || || || || || || || ||||| ||||| || | Sbjct 1142 TTTTCAACGTCAGCTTATGCATCACCGGCAGCACGGCGGTGACCGTGTTCTCGGTGAACA 1201 Query 65622 ATTGCTGGCGGGCCATAATGACGATAATAAAACC 65655 |||||||||||||| ||||| ||||| || || Sbjct 1202 GCTGCTGGCGGGCCATGATGACAATAATGAAGCC 1235 Score = 105 bits (116), Expect = 3e-18 Identities = 69/76 (91%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 1320 TGGTGTCCCCTGCAGGAATCGAACCTGCAATTAGCCCTTAGGAGGGGCTCGTTATATCCA 1379 ||||||||||| ||||||||||||||| || |||||||||||||||||| ||||||||| Sbjct 447 TGGTGTCCCCTACAGGAATCGAACCTGTAACTAGCCCTTAGGAGGGGCTTGTTATATCCG 506 Query 1380 TTTAACTAAGAGGACA 1395 |||||||||| |||| Sbjct 507 TTTAACTAAGGAGACA 522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 210861960119784