Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_028696.2 Length=41338 Score E Sequences producing significant alignments: (Bits) Value seq21315 643 3e-180 >seq21315 Length=730 Score = 643 bits (712), Expect = 3e-180 Identities = 433/483 (90%), Gaps = 6/483 (1%) Strand=Plus/Minus Query 39721 GGCTTACCACGGGTTTCCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGCTGTCCGGC 39780 || ||||| || |||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct 730 GGTTTACCGCGAGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGTCTGCTGTCCGGC 671 Query 39781 GAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGG 39840 ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 670 GAGAAGGACATTGCCCAGCCCACTGGCTTTCTTGCGAACAGGTCGAGAACAACGGCGAGG 611 Query 39841 TACGCCCAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGC 39900 ||||||||||| || || ||||||||||||||||| |||||||||| || || ||| Sbjct 610 TACGCCCAGCGTTTGCCTGTCCAGATATAGGTCACGTCACCGCACC-----TGGTTAGGC 556 Query 39901 TCGGTCACGGCGAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCA 39960 || || ||||||||||| || ||||| | || ||||||||||| || |||||||| || Sbjct 555 TCCGTTACGGCGAACTGTCGCTCAAGATGATTTGGGATAGCAACGTGCTCATGACCGCCT 496 Query 39961 CGTTTATACCGGTAAGTCGGCTGCTGACAGCTGACCAGCCCCAGC-TCTTTCATGAGTCT 40019 || |||||||||| || ||| |||||||| |||| |||||||||| ||||||||||| || Sbjct 495 CGCTTATACCGGTGAGCCGGTTGCTGACAACTGAACAGCCCCAGCCTCTTTCATGAGCCT 436 Query 40020 GCCAGCAAGCCAGCGCCCCATCTGGTAGCCTCTCTGGGTTGCCATTGTGGCGATGCTTCT 40079 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 435 GCCAGCAAGCCAGCGCCCCATCTGATAGCCTCTCTGGGTTGCCATTGTGGCGATGCTTCT 376 Query 40080 TGCTCCGGCAGAGCCGTGGCTGATGCCATGCAGTTCAAGTACCTGGCTGCGTAATACAGC 40139 ||||||||| || || ||||||||||||||||| ||||||||||| |||||||||| ||| Sbjct 375 TGCTCCGGCCGAACCATGGCTGATGCCATGCAGCTCAAGTACCTGACTGCGTAATATAGC 316 Query 40140 CCGTCTGCCGTCTGGCTTTTCAGGACGGTTTTTCCAGTATTTGTAGCTGCTGCGATGGAC 40199 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| || Sbjct 315 CCGTCTGCCGTCTGGCTTTTCAGGATGGTTTTTCCAGTATTTGTAGCTACTGCGATGAAC 256 Query 40200 CCC 40202 ||| Sbjct 255 CCC 253 Score = 643 bits (712), Expect = 3e-180 Identities = 433/483 (90%), Gaps = 6/483 (1%) Strand=Plus/Minus Query 17096 GGCTTACCACGGGTTTCCCATGCCATTTCCAGTGCTTTCATGGTAAGCCTGCTGTCCGGC 17155 || ||||| || |||||||||||||||||||| ||||||||||| || |||||||||||| Sbjct 730 GGTTTACCGCGAGTTTCCCATGCCATTTCCAGCGCTTTCATGGTGAGTCTGCTGTCCGGC 671 Query 17156 GAGAACGACATGGCCCAGCCCACTGGTTTTCTTGCGAACAGGTCGAGAACAACGGCGAGG 17215 ||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 670 GAGAAGGACATTGCCCAGCCCACTGGCTTTCTTGCGAACAGGTCGAGAACAACGGCGAGG 611 Query 17216 TACGCCCAGCGCTTACCCGTCCAGATATAGGTCACATCACCGCACCACACCTGATTTGGC 17275 ||||||||||| || || ||||||||||||||||| |||||||||| || || ||| Sbjct 610 TACGCCCAGCGTTTGCCTGTCCAGATATAGGTCACGTCACCGCACC-----TGGTTAGGC 556 Query 17276 TCGGTCACGGCGAACTGCCGTTCAAGGTAGTTAGGGATAGCAACATGTTCATGACCACCA 17335 || || ||||||||||| || ||||| | || ||||||||||| || |||||||| || Sbjct 555 TCCGTTACGGCGAACTGTCGCTCAAGATGATTTGGGATAGCAACGTGCTCATGACCGCCT 496 Query 17336 CGTTTATACCGGTAAGTCGGCTGCTGACAGCTGACCAGCCCCAGC-TCTTTCATGAGTCT 17394 || |||||||||| || ||| |||||||| |||| |||||||||| ||||||||||| || Sbjct 495 CGCTTATACCGGTGAGCCGGTTGCTGACAACTGAACAGCCCCAGCCTCTTTCATGAGCCT 436 Query 17395 GCCAGCAAGCCAGCGCCCCATCTGGTAGCCTCTCTGGGTTGCCATTGTGGCGATGCTTCT 17454 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 435 GCCAGCAAGCCAGCGCCCCATCTGATAGCCTCTCTGGGTTGCCATTGTGGCGATGCTTCT 376 Query 17455 TGCTCCGGCAGAGCCGTGGCTGATGCCATGCAGTTCAAGTACCTGGCTGCGTAATACAGC 17514 ||||||||| || || ||||||||||||||||| ||||||||||| |||||||||| ||| Sbjct 375 TGCTCCGGCCGAACCATGGCTGATGCCATGCAGCTCAAGTACCTGACTGCGTAATATAGC 316 Query 17515 CCGTCTGCCGTCTGGCTTTTCAGGACGGTTTTTCCAGTATTTGTAGCTGCTGCGATGGAC 17574 ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| || Sbjct 315 CCGTCTGCCGTCTGGCTTTTCAGGATGGTTTTTCCAGTATTTGTAGCTACTGCGATGAAC 256 Query 17575 CCC 17577 ||| Sbjct 255 CCC 253 Score = 165 bits (182), Expect = 2e-36 Identities = 111/124 (90%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 40293 GTAGCCTTTTTTAATATTTCATTTTCCATTTCAATACGTTGTAGCTTTTTCCTGAGCTCA 40352 || ||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||| Sbjct 128 GTGGCCTTTTTTAATATTTCGTTTTCCATTTCAATGCGTTGTAGCTTTTTCTTTAGCTCA 69 Query 40353 CGGATTTCAATTTGTTCCGGGGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGCCGCTCA 40412 || ||||| ||||||||||| || || |||||||||||||| |||||||||| |||||| Sbjct 68 CGTATTTCGATTTGTTCCGGCGTTATCGGGGAGGCTTTTGGCGTTTTGCCCTAACGCTCA 9 Query 40413 TCAC 40416 |||| Sbjct 8 TCAC 5 Score = 165 bits (182), Expect = 2e-36 Identities = 111/124 (90%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 17668 GTAGCCTTTTTTAATATTTCATTTTCCATTTCAATACGTTGTAGCTTTTTCCTGAGCTCA 17727 || ||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||| Sbjct 128 GTGGCCTTTTTTAATATTTCGTTTTCCATTTCAATGCGTTGTAGCTTTTTCTTTAGCTCA 69 Query 17728 CGGATTTCAATTTGTTCCGGGGTAATGGGGGAGGCTTTTGGTGTTTTGCCCTGCCGCTCA 17787 || ||||| ||||||||||| || || |||||||||||||| |||||||||| |||||| Sbjct 68 CGTATTTCGATTTGTTCCGGCGTTATCGGGGAGGCTTTTGGCGTTTTGCCCTAACGCTCA 9 Query 17788 TCAC 17791 |||| Sbjct 8 TCAC 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132117729780400