Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_029013.1 Length=177688 Score E Sequences producing significant alignments: (Bits) Value seq25611 179 4e-40 seq21897 89.7 6e-13 seq26786 82.4 9e-11 seq24701 82.4 9e-11 >seq25611 Length=618 Score = 179 bits (198), Expect = 4e-40 Identities = 226/311 (73%), Gaps = 11/311 (4%) Strand=Plus/Plus Query 77095 AGAAAGCATCATACAGGCGATCATTTGCAACGTCAG---GGCTGAACAGTGTGATGTAAT 77151 |||| ||||| ||||||| | ||||||| |||||||||| ||||||| Sbjct 302 AGAACGCATCGTACAGGCC--------CGACGTCAGACGGGCTGAACAGGGTGATGTCGC 353 Query 77152 CGTTATTGATTAAACGCTTATACATCAAATCGTTAAGCTGAACGCCATAATCCAGGTGAC 77211 || || | ||||||| |||||||| | ||| | ||| ||||| || |||| ||||| Sbjct 354 CGCCTTTCACCAAACGCTGATACATCAGTTTGTTGATCTGTACGCCGTAGTCCATGTGAC 413 Query 77212 GAATACGGTTATTCTCAACACCTTTGTTGTTTTTCAGAACCAGCAGGTTTTCAACTTCCA 77271 ||| ||||| || || || |||||||||||| || | |||| |||||||||||| Sbjct 414 GAACGCGGTTGCCTTCGACGCCACGGTTGTTTTTCAGCACTAACAGGCTTTCAACTTCCA 473 Query 77272 AATGCCAGATCGGATAATACAACGTTGCAGCACCACCACGAACGCCACCTTGTGAACAGG 77331 ||||||| || || || ||| || |||||||||||||| ||||| || || ||||||| Sbjct 474 AATGCCACATTGGGTAGAACAGAGTGGCAGCACCACCACGCACGCCGCCCTGAGAACAGG 533 Query 77332 ATTTAACCGCTGTCTGAATATGTTTCCAGAACGGGATCACGCCTGTATGTACTGCTTCAC 77391 |||| || || ||||| | || || |||| || || ||| || || | ||||| | Sbjct 534 ATTTCACTGCGGTCTGGAAGTGCTTGTAGAAAGGAATACAGCCGGTGTGGAAAGCTTCGC 593 Query 77392 CACCACGGATT 77402 | || || ||| Sbjct 594 CGCCGCGAATT 604 >seq21897 Length=916 Score = 89.7 bits (98), Expect = 6e-13 Identities = 169/249 (68%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 78435 ATCACCACCTGTCCATACCAGATCACCAACTTCGTACCCGCAAATATCAGCGATAATATG 78494 |||||| |||||||| || | ||||| ||||| |||| | || | ||||| Sbjct 462 ATCACCGCCTGTCCAGACGAAGTCACCGACTTCAAGGTCGCACTGCTGGGCCACCATATG 521 Query 78495 CGTCAGGAGAGCGTAGGAGGCGATATTGAACGGCAACCCTAAGAAGACATCAACCGAACG 78554 | ||| ||||||||| ||| || || || |||| || | |||||| || ||||| Sbjct 522 CACCAGCAGAGCGTAGCTGGCAATGTTAAATGGCAGACCAAGGAAGACGTCGCATGAACG 581 Query 78555 CTGATACCACTGTAGAGACAGTTTACCGTTGATTACGACGAACTGGAAGAAACAGTGACA 78614 |||||| ||| || || || ||||| ||| ||||||||||||| ||| || Sbjct 582 CTGATAAAGCTGGCAGGAGAGCTTGCCGTTAGCCACGTAGAACTGGAAGAAAGCGTGGCA 641 Query 78615 CGGACGCAATGCCATTTTATCCAGATCAACAGGGTTCCATGCGGAAACGATGATCCCGCG 78674 || || ||||| | ||||| || | |||||||| ||||| ||||| | || Sbjct 642 AGGGGCCAGCGCCATCTGATCCAATTCGCCGACGTTCCATGAAGAAACAATGATGCGACG 701 Query 78675 ATCGTCTGG 78683 | |||||| Sbjct 702 AGAGTCTGG 710 >seq26786 Length=484 Score = 82.4 bits (90), Expect = 9e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 74796 CCAACTAGGTAAGAACTCACTTCAACCTCTTGCGGGGCTACCTGAACGTTGTCAGACTTC 74855 || || || || || || ||||| || ||||| || || ||||| |||||||||||| | Sbjct 273 CCGACCAGATAGGAGCTGACTTCTACTTCTTGTGGCGCAACCTGCACGTTGTCAGACACC 332 Query 74856 AACCATTTGTTCATCCACGGGTACGGGTTAGGACTCGGTTTAAACGGAGACTGT-AACCC 74914 | |||| ||| ||||| ||| ||||| | | || ||| || || | |||| | || Sbjct 333 AGCCATGCGTTGATCCATGGGATTGGGTTGGTGCGCGTTTTGAATGGCG-CTGTCAGGCC 391 Query 74915 AACCGCTCGCATACGTTGGTCGGTTAAGTGTTCGATGTA 74953 ||||||| ||||||| || ||| | || |||| ||| Sbjct 392 AACCGCTTGCATACGGATGTTGGTGATGTACTCGACGTA 430 >seq24701 Length=356 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 75996 GCACCGTCGCGGGTGTTGTGATAATACAGAGTTTTCACGCCGTAGTAGTTCGCATAAAGC 76055 |||||||| |||||||| || || ||||| |||||||||||| | | | || ||| Sbjct 210 GCACCGTCACGGGTGTTCTGGTAGTACAGGGTTTTCACGCCGAACTTATAGGCGGTCAGC 151 Query 76056 AGGTCAT-CAATGATGGTTTCAGATTTCACTTTACCATCTGGGAAGTTAGCCGGATCATA 76114 ||||| | || | |||||| |||||| | | |||||| ||||| || || Sbjct 150 AGGTCTTTCAGCAACTGTTTCATCGG-CACTTTGCTGTTCGGGAAGCGCGCCGGGTCGTA 92 Query 76115 GTTGGTGTTTGCAGAGATCGCTTGATCAACAAACTTCTGCAT 76156 ||||||||| | || ||||| ||||| | ||| |||||||| Sbjct 91 GTTGGTGTTAGACGAAATCGCCTGATCGATAAATTTCTGCAT 50 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568282209150720