Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq9766 158 3e-33 seq9767 140 8e-28 seq3042 140 8e-28 seq20961 118 3e-21 seq6397 114 3e-20 seq133 93.3 1e-13 seq13661 89.7 1e-12 seq13660 87.8 4e-12 >seq9766 Length=663 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| |||||||| || || || | ||||| || | | || || ||||| Sbjct 167 AGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAAAGGGTCCTGCCATCC 226 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | || || |||||||| ||||| ||||||||||| Sbjct 227 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCC 286 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| ||||| ||||| || | || || || |||||||| ||| Sbjct 287 TGAATCTTCGCCTTCACATTGTCGATCGTGTCCGAAGACTCGACTTCCAACGTGATGGTC 346 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| | ||||| Sbjct 347 TTGCCAGTCAATGTCTTGACGAAGATCTGCAT 378 Score = 149 bits (164), Expect = 1e-30 Identities = 166/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| || || || ||||| || ||||||| |||||||| | | ||| Sbjct 385 ACGAAGACGAAGGACGAGATGAAGGGTGGACTCCTTTTGGATGTTGTAATCCGAAAGAGT 444 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || ||||| |||||||| || |||||||| || ||||| || ||||| || ||||| Sbjct 445 GCGTCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCGGGAGGGATACC 504 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| ||| || ||||||||||| || | || || || | Sbjct 505 CTCCTTGTCTTGGATCTTCGCCTTGACGTTATCGATGGTGTCCGACGACTCAACCTCAAG 564 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | || || | ||| | ||||| Sbjct 565 GGTGATGGTCTTGCCCGTGAGCGTCTTCACGAAGATCTGCAT 606 >seq9767 Length=446 Score = 140 bits (154), Expect = 8e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 ||||| |||| ||||| || | | ||| | || ||||| | |||||| ||||||||| Sbjct 444 TCTTTCTGGATGTTGTAGTCAGAGAGAGTACGGCCGTCTTCCAACTGCTTTCCAGCGAAG 385 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 ||||| || ||||||||||| || || || |||||||| |||||||| ||| || Sbjct 384 ATAAGACGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 325 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 |||||||| || |||| || || || | ||||| |||||||||||||| || || | | Sbjct 324 TCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACG 265 Query 225703 AACACTTGCATT 225714 || | ||||||| Sbjct 264 AAGATTTGCATT 253 >seq3042 Length=1648 Score = 140 bits (154), Expect = 8e-28 Identities = 146/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 ||||| |||| ||||| |||| | ||| | || ||||| | |||||| || |||||| Sbjct 3 TCTTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCTTCCAACTGCTTTCCGGCGAAG 62 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 || || |||||||||||||| || ||||| |||||||| || ||||| ||| || Sbjct 63 ATGAGGCGTTGTTGGTCGGGTGGGATACCCTCCTTGTCCTGAATCTTGGCCTTAACGTTG 122 Query 225643 TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATG 225702 |||||||| || |||| || || || | ||||| |||||||||||||| || || | | Sbjct 123 TCGATGGTATCGGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACG 182 Query 225703 AACACTTGCATT 225714 || | ||||||| Sbjct 183 AAGATTTGCATT 194 >seq20961 Length=332 Score = 118 bits (130), Expect = 3e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| |||||||| || || || | |||||||| | | || || ||||| Sbjct 167 AGGACAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGGGTCCTGCCATCC 226 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| | || || |||||||| ||||| ||||||||||| Sbjct 227 TCGAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCGGGAGGAATGCCTTCCTTGTCC 286 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGA 225656 || ||||| ||||||| || || ||||| || Sbjct 287 TGAATCTTCGCCTTCACATTGTCAATCGTGTCCGA 321 >seq6397 Length=2201 Score = 114 bits (126), Expect = 3e-20 Identities = 109/138 (79%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || || || |||||| ||||| ||||| ||| ||||||||||||| |||||||||| Sbjct 1328 ATGTCAAGAGTAGGTAAGGTTCTTCGCGTTGCATCGAATTAAACCACATGCTCCACCGCT 1269 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGA 7844 | | | | |||||| || |||||||||||||||||||| |||| | | |||| || Sbjct 1268 TGTGCGGGCCCCCGTCAATTCATTTGAGTTTTAACCTTGCGGCCGTACTCCCCAGGCGGT 1209 Query 7845 ATATTT-ACGCGTTAGCT 7861 |||| ||||||||||| Sbjct 1208 CGATTTAACGCGTTAGCT 1191 >seq133 Length=4238 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 || ||||||||||| | ||| | ||| ||||||||| || | ||||| || || Sbjct 3379 AAAGGTAATTTATGTAGAGACATTCCATTAGTTCTCATATTTAAAGTTGTAGTTATGAAA 3438 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 || ||||| |||| | |||||| | ||||| | ||||||||| || || |||||||| Sbjct 3439 TTAATAGCACCTAATAAAGAAGAAACCCCTGCTAAATGTAAACTGAAGATCGCTAAATCA 3498 Query 371485 ACGGAACCGCCGGAGTGAGCTACAATAGAACTTAACGGCGGGTAAACTGTTCAGCCGGT 371543 || ||||| || ||||| | | || | | ||| || || ||||| || || || || Sbjct 3499 ACAGAACCTCCAGAGTGTGATTGAACACTAGCTAATGGAGGATAAACAGTCCATCCTGT 3557 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 370673 TCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGAT 370732 || || |||||||| || ||||| | |||||||| | ||||||||| || || || | | Sbjct 3202 TCTGGGTGACCAAAGAACCAGAAAAGGTGTTGATATAAGATAGGATCACCACCACCAGCT 3261 Query 370733 GGATCAAAAAAGCTAGTATTAAAATTTCTATCAGT 370767 |||||| | || ||||||||||| |||||||| || Sbjct 3262 GGATCATAGAAACTAGTATTAAAGTTTCTATCTGT 3296 Score = 84.2 bits (92), Expect = 5e-11 Identities = 210/316 (66%), Gaps = 5/316 (2%) Strand=Plus/Minus Query 7429 AAGGAACTGGAAACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATA 7488 ||| || ||||| || ||| |||| ||| | ||| ||||||| || || || Sbjct 3895 AAGAAATTGGAACACTT-TATCTAATTTTTTCAGTTTTTGCTGGTATGATTGGAACAGCT 3837 Query 7489 TTTTCTATGATTATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAAT 7548 ||||| | | || || |||||| | | || || || |||| | || | ||| || Sbjct 3836 TTTTCAGTTTTAATTAGATTAGAACTTTCAGCACCAGGAGTTCAATTTTTAAATGGAGAT 3777 Query 7549 AGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTT 7608 ||| | | || || || || | || || || ||| ||||||||||||| | ||| Sbjct 3776 CATCAATTATTTAATGTGATAATATCTGCTCACGCATTTATTATGATTTTCTTCATGGTT 3717 Query 7609 ATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTT--AATGATTGGTGCTC 7666 ||||| | | | | || ||||| || |||| ||| | ||| | | || || |||| Sbjct 3716 ATGCCTGGTTTAGTGGGAGGTTTTGGTAATTATTTCTTACCTATCCACTG--CGGGGCTC 3659 Query 7667 CTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTAT 7726 | |||||||| ||||| || | || ||||| || || ||| |||| ||||| ||| Sbjct 3658 CCGATATGGCATTTCCTAGATTAAATAATATCTCATTCTGGTTATTACCTCCTTCATTAA 3599 Query 7727 TTCTAGGGTTGGTAAG 7742 || || || ||||| Sbjct 3598 TTTTACTATTAGTAAG 3583 >seq13661 Length=1430 Score = 89.7 bits (98), Expect = 1e-12 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||||||||| || || |||| ||||| ||| | || | || ||| Sbjct 724 AGCACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCT 783 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || || ||||| ||||||||||| || ||||| |||||||| || |||| Sbjct 784 TCGAGTTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGTGGGATAC 832 >seq13660 Length=1427 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/125 (76%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 225486 ATTCTAACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGC 225545 ||||||||| | | || ||||||||||| ||||| || || |||| ||||| ||| Sbjct 711 ATTCTAACGCACCGT-AGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 769 Query 225546 CAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGG 225605 | || | || ||||| || ||||| ||||||||||| || ||||| |||||||| || Sbjct 770 GAGGGTGCGGCCGTCTTCGAGTTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGTGG 829 Query 225606 AATAC 225610 |||| Sbjct 830 GATAC 834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192119667172196