Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1431 181 2e-40 seq21732 91.5 2e-13 >seq1431 Length=25833 Score = 181 bits (200), Expect = 2e-40 Identities = 381/562 (68%), Gaps = 22/562 (4%) Strand=Plus/Minus Query 46630 CATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGC 46689 || |||||||| || | ||| ||||||| || || | |||||| ||||| || || Sbjct 6201 CAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGATAAGTTCGTTTGAAAAGGTAAGA 6142 Query 46690 CCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAAT 46749 |||||||| || || ||||| |||||||| || || |||||||| |||||||| |||||| Sbjct 6141 CCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCCGCGAATGATCCAGAGAAGAAT 6082 Query 46750 ATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCC-----GTAACTGGC-ATCATTA 46803 || ||||| || ||||||||||||| || | ||||| | | || | ||| || Sbjct 6081 ATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCCAAAGGATGAATGCCGATC-TTC 6023 Query 46804 TGAATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCA 46863 | ||||| | ||||| || ||||||| || | |||||| || || || || || Sbjct 6022 T--ATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATACAAGGTATGGTCTCGATCGCG 5965 Query 46864 TTAAAGAGAAAGtttttttC-----ATCACTATCTTTAACATATGTATCTATTAAAAGAC 46918 | | |||| | || || | | || || | |||||||| || | | | Sbjct 5964 TCGA----AAAGGTGTTGTCGCTGGAGGGGT-TCCTTGATGTATGTATCGATAAGCATAG 5910 Query 46919 TATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTT 46978 ||| | || || || ||||| || || || || || |||||||||||||| | | Sbjct 5909 AATAGGTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAGCCGTAAAAACATCTAACCT 5850 Query 46979 CAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCAC 47038 ||| || || ||||| || |||||||||| || || ||||| |||||||| || Sbjct 5849 CAGCAACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTTTCATTAACTATTCCGTCCG 5790 Query 47039 TAGCAGCAAAAAATGCCAATACATG---TTTAATAAAATATTTTTCATCGGTAGTCAGTT 47095 ||| || || || || | ||||| | | | || || || ||| | | || Sbjct 5789 AAGCTGCGAAGAAAGCAAGGACATGGGATATGAAGAAGCGTTCGTCCTCGTTCAGCCGTA 5730 Query 47096 TATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCT 47155 | |||| || | || || || ||||| | |||||| | ||||| |||||||||| Sbjct 5729 GAGTCCAATCCATCCAGTCCTTGGACATATCAATTTCTTCCACGGTCCAAAATGACGCCT 5670 Query 47156 CTGCTTTTTTATACATATTCCA 47177 ||| | ||| ||||| ||||| Sbjct 5669 GTGCCTGTTTGTACATTTTCCA 5648 Score = 131 bits (144), Expect = 2e-25 Identities = 342/516 (66%), Gaps = 8/516 (2%) Strand=Plus/Plus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 || || || || || ||||| ||||| ||||||||||| || ||||| || || || ||| Sbjct 3959 TCATTGGAGAAGGTAAGCCCTGGCATGAGTCCACGCTTCTTCAGCCAGAAGATGGCTGCG 4018 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 || |||||||| ||||| |||||||| || || ||||| ||||| || | || | | Sbjct 4019 AAGGATCCAGAGAAGAAGATGCCTTCCACTGCGGCGAAGGCGACGAGGCGTTCAGCAAAG 4078 Query 46792 CTGGCATCATT-AT--GA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGG 46847 | | | | || || || ||||| | ||||| |||||||| ||| | ||||| Sbjct 4079 GTAG-ACCGTTGATCGGAGATCCAATGAAGGGCCCAGTCAGCCTTGCGCTTGATGCAAGG 4137 Query 46848 CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATC 46907 || ||||| || || | ||||| ||| ||| || |||||||| || ||||| Sbjct 4138 AATGGTTTCGATCGCGTCGAAGAGGTAGTCGCGTTCGGCAGCATCTTTAATGTAGGTATC 4197 Query 46908 TATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAA 46967 || | ||| ||| |||| || ||||| || || || || || ||||| || Sbjct 4198 GATGAGAAGGGAATAGGTTTCGCTGTGGATGTTCTCCATCATAATTTGGAAGCCGTAGAA 4257 Query 46968 ACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCAC 47027 || | ||||| | | || || || | |||| |||||| ||| || || || || Sbjct 4258 GCAACGAGCTTCCGCAGCTTGGACTTCGTTGGAAAAACGTTCAACCAAGTTTTCGTTGAC 4317 Query 47028 TATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGT 47087 || || || ||||| || || || | ||||| || || | ||||| | Sbjct 4318 AATACCGTCTGAGGCAGCGAAGAAGGCGAGAACATGAGAGATGAAGTGGCGTTCATTGTC 4377 Query 47088 AGTCAGTTTATT---CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 47144 ||| || || |||||| | | || || || | || | || ||||| ||||| Sbjct 4378 GTTCAACTTGTTAGACCAGTCGTGAAGGTCCTTCGAAAGGTCCATCTCCTCAGCAGTCCA 4437 Query 47145 GAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 ||| || || || || || || ||||| | |||||| Sbjct 4438 GAAAGAAGCTTCGGCCTTCTTGTACATTTGCCATAT 4473 >seq21732 Length=457 Score = 91.5 bits (100), Expect = 2e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 76916 TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 |||| || |||||||| |||||||| |||||| ||||| || ||| || || | Sbjct 451 TTCAGAGTATCATAGATACCCTCTATCGAGTCATCCTTCATGCAAACAAGGAAGCACGAA 392 Query 76976 GACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCAT 77035 || ||| |||| || || || || || | || || |||||||||||||| || Sbjct 391 CTCAGTTGGGGATGCGGGGTGCCAGCGTTGAATAGAGTTGGCGATGCATGAGTGAAATAT 332 Query 77036 TTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCT 77095 || || | || || || || ||||| || ||| ||||| |||||| || Sbjct 331 CGCTCCGACATGAGGTTATAAGTCTCAATGACGCGTTCGATATCGTTACCATGAATGCCA 272 Query 77096 ACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 |||||||||||||| | |||||| || || ||||| Sbjct 271 ACAGCGACACGCATGATCATATGTTGGGGGCGTTC 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712694372810880