Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_031057.1 Length=180219 Score E Sequences producing significant alignments: (Bits) Value seq25611 179 4e-40 seq21897 91.5 2e-13 seq25639 82.4 9e-11 seq24701 82.4 9e-11 >seq25611 Length=618 Score = 179 bits (198), Expect = 4e-40 Identities = 226/311 (73%), Gaps = 11/311 (4%) Strand=Plus/Minus Query 43578 AATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACATATTCAGAC 43637 ||| || || || ||||| | || || ||| || || |||| || || | ||||| Sbjct 604 AATTCGCGGCGGCGAAGCTTTCCACACCGGCTGTATTCCTTTCTACAAGCACTTCCAGAC 545 Query 43638 AGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTATTATCC 43697 || || ||||||||||| || || ||||| |||||||||||||| || ||| || || Sbjct 544 CGCAGTGAAATCCTGTTCTCAGGGCGGCGTGCGTGGTGGTGCTGCCACTCTGTTCTACCC 485 Query 43698 GATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTTGAGAA 43757 || ||||||||||||||||||| |||| | || |||||||||||| || || || Sbjct 484 AATGTGGCATTTGGAAGTTGAAAGCCTGTTAGTGCTGAAAAACAACCGTGGCGTCGAAGG 425 Query 43758 TAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTTAACGATTTGATGTATAAGCGTTT 43817 ||||| |||||||| |||| || ||||| ||| | ||| | |||||||| ||||||| Sbjct 424 CAACCGCGTTCGTCACATGGACTACGGCGTACAGATCAACAAACTGATGTATCAGCGTTT 365 Query 43818 AATCAATAACGATTACATCACACTGTTCAGCC---CTGACGTTGCAAATGATCGCCTGTA 43874 | || || ||||||| |||||||||| ||||||| | ||||||| Sbjct 364 GGTGAAAGGCGGCGACATCACCCTGTTCAGCCCGTCTGACGTCG--------GGCCTGTA 313 Query 43875 TGATGCTTTCT 43885 ||||| |||| Sbjct 312 CGATGCGTTCT 302 >seq21897 Length=916 Score = 91.5 bits (100), Expect = 2e-13 Identities = 176/260 (68%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 42297 CCAGACGATCGCGGGATCATCGTTTCCGCATGGAACCCTGTTGATCTGGATAAAATGGCA 42356 |||||| ||| | ||||| ||||| |||||||| | || ||||| | ||||| Sbjct 710 CCAGACTCTCGTCGCATCATTGTTTCTTCATGGAACGTCGGCGAATTGGATCAGATGGCG 651 Query 42357 TTGCGTCCGTGTCACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAG 42416 || || || ||| ||||||||||||| ||| ||||| || || || ||| Sbjct 650 CTGGCCCCTTGCCACGCTTTCTTCCAGTTCTACGTGGCTAACGGCAAGCTCTCCTGCCAG 591 Query 42417 TGGTATCAGCGTTCGGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCT 42476 ||||||||||| || |||||| | || |||| || || || ||| ||||||| Sbjct 590 CTTTATCAGCGTTCATGCGACGTCTTCCTTGGTCTGCCATTTAACATTGCCAGCTACGCT 531 Query 42477 CTCCTGACGCATATTATCGCTGATATTTGCGGGTACGAAGTAGGTGATCTGGTTTGGACA 42536 || ||| |||||| | || | |||| ||||| ||||| | || |||||| Sbjct 530 CTGCTGGTGCATATGGTGGCCCAGCAGTGCGACCTTGAAGTCGGTGACTTCGTCTGGACA 471 Query 42537 GGTGGTGATGTCCATATCTA 42556 || |||||| ||| |||| Sbjct 470 GGCGGTGATACCCACCTCTA 451 >seq25639 Length=417 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 53392 ATTGAGTTTCAACCGACTGTTAAAGTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTA 53451 || ||||| || || || ||| || || || || ||||| || || || || ||| | Sbjct 273 ATGGAGTTCCAGCCAACGGTTCGCGTCGAGGGCGGCCAGCATCTTAATGTAAACGTGATG 332 Query 53452 CGTCGCGAAACCCTGGAAGATGCTGTGAAACATCCTGAGAAGTACCCACAGTTAACGATC 53511 || || || | |||||||| || || || || |||||||||||||||| | | || | Sbjct 333 CGCCGTGAGCCTCTGGAAGACGCGGTAAAGCACCCTGAGAAGTACCCACCGCTGACCCTT 392 Query 53512 CGCGTTTCAGGTTATGCAGTTCG 53534 ||| ||||||| ||||| || || Sbjct 393 CGCCTTTCAGGCTATGCGGTGCG 415 >seq24701 Length=356 Score = 82.4 bits (90), Expect = 9e-11 Identities = 117/162 (72%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 44824 ATGCAGAAGTTTGTTGATCAAGCGATCTCTGCAAACACCAACTATGATCCGGCTAACTTC 44883 |||||||| ||| | ||||| ||||| || | ||||||||||| || ||||| |||| Sbjct 50 ATGCAGAAATTTATCGATCAGGCGATTTCGTCTAACACCAACTACGACCCGGCGCGCTTC 109 Query 44884 CCAGATGGTAAAGTGAAATCTGAAACCATCATTG-ATGACCTGCTTTATGCGAACTACTA 44942 || | | |||||| |||||| | || | |||||||| || | | | Sbjct 110 CCGAACAGCAAAGTG-CCGATGAAACAGTTGCTGAAAGACCTGCTGACCGCCTATAAGTT 168 Query 44943 CGGCGTGAAAACTCTGTATTATCACAACACCCGCGACGGTGC 44984 |||||||||||| ||||| || || |||||||| |||||||| Sbjct 169 CGGCGTGAAAACCCTGTACTACCAGAACACCCGTGACGGTGC 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 576378682352560