Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq24580 111 2e-19 seq21897 98.7 2e-15 >seq24580 Length=580 Score = 111 bits (122), Expect = 2e-19 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 200098 GACCGTACCGGTANNNNNACCACGTCTATTTTCGGTGCACAGATGCGCTTCAATCTACAA 200157 ||||||||||||| || ||| ||||| ||| |||||||| |||||||| ||| Sbjct 455 GACCGTACCGGTACGGGTACGGTGTCAATTTTTGGTCATCAGATGCGTTTCAATCTGCAA 514 Query 200158 GACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTCCGTTCCATCATTCACGAGCTG 200217 || ||||| ||| |||| || |||||||||||||| | || || |||||||| |||||| Sbjct 515 GATGGCTTTCCACTGGTAACCACCAAGAAGTGCCACTTACGCTCTATCATTCATGAGCTG 574 Query 200218 TTGTGG 200223 ||||| Sbjct 575 CTGTGG 580 >seq21897 Length=916 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 200501 ATGGTGAGTTAGGGCCTGTGTATGGTAAGCAGTGGCGTGATTGGATCGGGCCAGATGGTC 200560 |||| || | || || || ||||| ||||| ||||| | ||| || | | | ||| Sbjct 817 ATGGCGATCTCGGTCCGGTCTATGGCAAGCAATGGCGCGCCTGGGGCGCGGCCGCCGGTA 758 Query 200561 AACACCACGACCAAATCAGCACGGTCATCGACCAGCT-ACGTAATGATCCGGACAGTCGT 200619 | || |||||| | |||| |||||| | ||| | | | || ||||| ||| |||| Sbjct 757 AGCAGATCGACCAGTTAAGCAACGTCATCAAGCAGTTGAAGCAA-GATCCAGACTCTCGT 699 Query 200620 CGCATTATCGTTAGTGCATGGAATGTGGGTGAGTTGGATAAAATGGCTTTAGCGCCTTGC 200679 ||||| || ||| | ||||||| || || || |||||| | ||||| | || |||||| Sbjct 698 CGCATCATTGTTTCTTCATGGAACGTCGGCGAATTGGATCAGATGGCGCTGGCCCCTTGC 639 Query 200680 CATTCCTTCTTCCAGTTCTAC 200700 || | ||||||||||||||| Sbjct 638 CACGCTTTCTTCCAGTTCTAC 618 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 200203 ATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTGAACGAT 200262 |||||||| |||||| |||||||||| || ||||| ||||| || ||||| || Sbjct 914 ATCATTCATGAGCTGCTGTGGTTCCTCAAAGGTGAAACCAACATTGCTGATCTGCGTGAA 855 Query 200263 AACAATGTCACCATTTGGGACGAATGGGC 200291 ||||| ||||||||||||||||| ||||| Sbjct 854 AACAACGTCACCATTTGGGACGAGTGGGC 826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783096262272000