Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq9766 174 4e-38 seq3042 150 4e-31 seq9767 136 1e-26 seq20961 107 5e-18 >seq9766 Length=663 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || |||||||| ||||| || || ||| Sbjct 603 CAGATCTTCGTGAAGACGCTCACGGGCAAGACCATCACCCTTGAGGTTGAGTCGTCGGAC 544 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| || ||||| || || |||||||| || |||||| Sbjct 543 ACCATCGATAACGTCAAGGCGAAGATCCAAGACAAGGAGGGTATCCCTCCCGATCAGCAA 484 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||||||||| ||| | |||||| | ||||| ||| || Sbjct 483 CGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGACGCACTCTTTCGGATTACAACATC 424 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || ||||| || Sbjct 423 CAAAAGGAGTCCACCCTTCATCTCGT 398 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || | || || || || ||||| | || || || || ||| Sbjct 375 CAGATCTTCGTCAAGACATTGACTGGCAAGACCATCACGTTGGAAGTCGAGTCTTCGGAC 316 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||||||||| ||||| || ||||| |||||||| Sbjct 315 ACGATCGACAATGTGAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCCGACCAGCAG 256 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || || |||||||| ||||| ||||| ||| | || || ||| | Sbjct 255 CGCTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTTCTGACTACAACATT 196 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 195 CAGAAGGAGTCCACTCTTCACCTTGT 170 >seq3042 Length=1648 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || | || || || || |||||||||||||| || ||| || Sbjct 190 CAAATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCCGAT 131 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || |||||||||||||| || || ||||| || ||||| ||| Sbjct 130 ACCATCGACAACGTTAAGGCCAAGATTCAGGACAAGGAGGGTATCCCACCCGACCAACAA 71 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||||||||| ||| | ||||| || | ||||| |||| || ||| || Sbjct 70 CGCCTCATCTTCGCCGGAAAGCAGTTGGAAGACGGTCGCACTCTCTCCGACTACAACATC 11 Query 178104 CAAAAAGA 178111 || ||||| Sbjct 10 CAGAAAGA 3 >seq9767 Length=446 Score = 136 bits (150), Expect = 1e-26 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || | || || || || |||||||| ||||| || ||| || Sbjct 257 CAAATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGAT 316 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| || || ||||| || ||||| || Sbjct 317 ACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCACCCGACCAACAG 376 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| ||||| ||| | ||||| || | ||||| | || || ||| || Sbjct 377 CGTCTTATCTTCGCTGGAAAGCAGTTGGAAGACGGCCGTACTCTCTCTGACTACAACATC 436 Query 178104 CAAAAAGA 178111 || ||||| Sbjct 437 CAGAAAGA 444 >seq20961 Length=332 Score = 107 bits (118), Expect = 5e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 177978 TCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGAC 178037 || ||||| || || || || || |||||||||||||| ||||| || ||||| ||| Sbjct 321 TCGGACACGATTGACAATGTGAAGGCGAAGATTCAGGACAAGGAAGGCATTCCTCCCGAC 262 Query 178038 CAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTAT 178097 ||||| || | ||||| || || || |||||||| ||||| ||||| ||| | ||||| Sbjct 261 CAGCAGCGCTTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCAGGACCCTTTCTGATTAC 202 Query 178098 AACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||| | || || || || || || || ||||| Sbjct 201 AACATTCAGAAGGAGTCCACTCTTCACCTTGT 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203315802143196