Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq51 120 4e-22 >seq51 Length=3165537 Score = 120 bits (132), Expect = 4e-22 Identities = 291/437 (67%), Gaps = 3/437 (1%) Strand=Plus/Minus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 ||| ||||| || ||| | |||||||| | || || | ||||| ||||| ||||| Sbjct 1581922 ACAGGCGAAGTCAGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAG 1581863 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253 ||||||||||| || ||||| || | ||| || ||||| || ||||| ||||| ||||| Sbjct 1581862 GCCGGGCATTAGCCCGCGCTTCTTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAA 1581803 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTC-TCCATAACCG-GCGCT-GTCATG 24310 || || || || || || ||||||| || | || | | || | ||||| |||| Sbjct 1581802 GATACCCTCGACGGCGGCGAAGGCAACGAGCCGCTCAGCGAACACTGAGCGCTCGTCAGA 1581743 Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 24370 |||||| | ||||| || |||||||| || | || || || ||||| || || | Sbjct 1581742 TATCCAGCGGAGTGCCCAGTCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTC 1581683 Query 24371 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 24430 ||||| || | || ||| || | || || ||||| | || ||| | Sbjct 1581682 GAAGAGGAAGGTACGCTCGGCGGGATCCTTGATGTAGGTGTCAATGAGGAGGGAATAGGT 1581623 Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490 || || || | |||||| || || ||||| |||||||| || | ||||| | Sbjct 1581622 CTCAGAGTGCACGTTTTCGATCATTATCTGAAAGCCGTAGAAGCAGCGGGCCTCCGCGGC 1581563 Query 24491 CTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 24550 ||| ||||| | | || || || | | || || ||||| || ||||| ||| || Sbjct 1581562 CTGGACTTCATTCGAGAACCGCTCGACAAGGTTCTCGTTCACGATACCGTCTGAGGCGGC 1581503 Query 24551 AAAAAACGCCAATACAT 24567 || || || | |||| Sbjct 1581502 GAAGAAGGCGAGGACAT 1581486 Score = 113 bits (124), Expect = 5e-20 Identities = 378/583 (65%), Gaps = 9/583 (2%) Strand=Plus/Plus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 ||| || || || || ||| | ||||||||| | | || | |||||||| || || Sbjct 1579529 CAAGCACGCAAAGTCCGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGT 1579588 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 ||| |||| ||| ||||||||||| || ||||| || ||||| || || || || || || Sbjct 1579589 GAGACCGG-CATGAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAA 1579647 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTC 24307 ||| || || || || || |||||||| | || | || || | | | | |||| Sbjct 1579648 GAAGATACCCTCGACGGCGGCAAAGGCGACGAGACGCTCCGCAAAGGCAACCTCCTTGTC 1579707 Query 24308 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 24367 ||||| ||||||| ||||||||||| || | ||||| || || || || || Sbjct 1579708 GCTGATCCAACGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCAATGGC 1579767 Query 24368 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 24427 || ||||| || | | | | || || | || || || || | || || Sbjct 1579768 ATCGAAGAGGTATTCGCGCTGCTGAGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTA 1579827 Query 24428 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 24487 | || || |||||||| || || ||||| || |||||||| || | ||||| | Sbjct 1579828 GGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGTGCCTCCGC 1579887 Query 24488 AATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 24547 ||| || || | | || || || | | || || || || || || || || Sbjct 1579888 GGCCTGGACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGC 1579947 Query 24548 TGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTG-TTAGTTTAT 24603 || || || || | || || || || | | ||||| | || | || | Sbjct 1579948 AGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTC-GTTGAGGCGGTTGT 1580006 Query 24604 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 24663 |||| || | || || || || | ||||| || ||| | ||||| || || ||||| | Sbjct 1580007 TCCAGTCGTGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCAGAAGGAGGCCTCAG 1580066 Query 24664 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAA 24706 ||||||| ||||| | |||||| || || ||||| || || || Sbjct 1580067 CCTTTTTGTACATCTGCCAGATTTCGTGGTATTGGATGGGGAA 1580109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720575830240