Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq62 149 7e-31 >seq62 Length=3011317 Score = 149 bits (164), Expect = 7e-31 Identities = 196/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 ||||||||| ||||||| ||| ||| || | | | ||||| ||||| || || || Sbjct 1922495 GAGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAA 1922554 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCC 146114 ||||||||||||||| ||||||||||| || ||||| || | ||||| ||||| Sbjct 1922555 GTGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCC 1922614 Query 146115 GGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGA 146174 | ||||||| ||| ||||||||| ||||||| |||||||||||| |||| || Sbjct 1922615 ACGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCCTTCGCCGA 1922674 Query 146175 GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCT 146234 ||||| || | ||| ||| | || | | |||||| || ||||| |||| || || | Sbjct 1922675 GAGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGATGCCGCG 1922734 Query 146235 CCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 ||| | ||| ||||| ||||| |||| Sbjct 1922735 GAGGAACGTACGCTTCGTGGTGAGCAGAGGGA 1922766 Score = 143 bits (158), Expect = 3e-29 Identities = 195/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 145995 GAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAA 146054 ||||||||| ||||||| ||| ||| || | | | ||||| ||||| || || || Sbjct 1913229 GAGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAA 1913170 Query 146055 GTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCC 146114 ||||||||||||||| ||||||||||| || ||||| || | ||||| ||||| Sbjct 1913169 GTGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCC 1913110 Query 146115 GGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGA 146174 | ||||||| ||| ||||||||| ||||||| ||||||||||| |||| || Sbjct 1913109 ACGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCTTTCGCCGA 1913050 Query 146175 GAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCT 146234 ||||| || | ||| ||| | || | | |||||| || ||||| |||| || || | Sbjct 1913049 GAGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGATGCCGCG 1912990 Query 146235 CCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 ||| | ||| ||||| ||||| |||| Sbjct 1912989 GAGGAACGTACGCTTCGTGGTGAGCAGAGGGA 1912958 Score = 131 bits (144), Expect = 2e-25 Identities = 221/316 (70%), Gaps = 8/316 (3%) Strand=Plus/Plus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| || ||| | ||| |||| ||| ||||||| ||| |||||| | Sbjct 1921941 CATCTTCATCGGAATGCTGGGGTGCGGGTTGTATCCCTCCACGACAATGTCCTCACTCAC 1922000 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCT 145664 |||||||| || ||||||| |||| ||||||| |||| ||||| || || || Sbjct 1922001 AAAGTCATCGATCGTCTCCACCTTCCTCGCCCACCTGAGCTTGGGGAAGGGGCGCGG-CT 1922059 Query 145665 CCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCA 145723 | | || ||||| | ||| | || ||||||| | |||||||||||||||| || Sbjct 1922060 CGCGCTCCAGCTGCGTCCGCAGCGCGTCGACGTGGTCGCGGTAGACGTGCGCGTCACC-- 1922117 Query 145724 GGACGTGGATGAAGTCCCCG---GGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCA 145780 || ||||||| | | || | ||| | |||||| ||| |||||||||| || | Sbjct 1922118 -GAGCTGGATGATGAGCTCGTGTGCTTCGGTGTCCGTGACGTGCGCGACCATGTGCGTGA 1922176 Query 145781 GCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGT 145840 | |||| ||| || ||||||||||| | |||||||| | ||| | || ||||||| Sbjct 1922177 GGAGGGCGTACGATGCGATGTTGAAGGGAATGCCCAGCCCAAGGTCGGCAGAACGCTGGT 1922236 Query 145841 ACAGCTGGCAGGAGAG 145856 ||| |||| || || Sbjct 1922237 ACATGAGGCATGATAG 1922252 Score = 125 bits (138), Expect = 8e-24 Identities = 222/317 (70%), Gaps = 10/317 (3%) Strand=Plus/Minus Query 145545 CATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCT 145604 ||||| ||| || ||| | ||| |||| ||| ||||||| ||| |||||| | Sbjct 1913778 CATCTTCATCGGAATGCTGGGGTGCGGGTTGTATCCCTCCACGACAATGTCCTCGCTCAC 1913719 Query 145605 GAAGTCATCTATGTCCTCCACCCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCT 145664 |||||||| || ||||||| |||| ||| ||| | || ||||| || || || Sbjct 1913718 AAAGTCATCGATCGTCTCCACCTTCCTCGCCCACCTAAGCTTAGGGAAGGGGCGCGG-CT 1913660 Query 145665 CCTGGTC-AGCTG-GAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCC 145722 | | || ||||| | || ||| | || ||||||| |||||||||||||||| || Sbjct 1913659 CGCGCTCGAGCTGTGTGCG-CAGCGCATCGACGTGGTCACGGTAGACGTGCGCGTCGCCG 1913601 Query 145723 AGGACGTGGATGAAGTCCCCGGGC---TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTC 145779 || ||||||| | | || || ||| | |||||| ||| |||||||||| || Sbjct 1913600 AGC---TGGATGATGAGCTCGTGCGCCTCGGTGTCCGTGACGTGCGCGACCATGTGCGTG 1913544 Query 145780 AGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGG 145839 || |||| ||| || ||||||||||| | |||||||| | |||| | || |||||| Sbjct 1913543 AGGAGGGCGTACGACGCGATGTTGAAGGGAATGCCCAGCCCAAGGTCCGCAGAACGCTGG 1913484 Query 145840 TACAGCTGGCAGGAGAG 145856 |||| |||| || || Sbjct 1913483 TACATGAGGCATGACAG 1913467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075782117520