Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq51 394 1e-104 seq62 145 8e-30 seq2 127 2e-24 seq35 105 7e-18 seq13 98.7 1e-15 seq117 93.3 4e-14 >seq51 Length=3165537 Score = 394 bits (436), Expect = 1e-104 Identities = 507/691 (73%), Gaps = 14/691 (2%) Strand=Plus/Minus Query 116600 CGCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCC 116659 || || ||||| | |||||||| ||||||| || || |||| |||||||||||||| Sbjct 1580124 CGTCGCTTCGTCCTCTTCCCCATCCAATACCACGAAATCTGGCAGATGTACAAAAAGGCT 1580065 Query 116660 GAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAG 116719 ||||| || |||||||| | |||||| |||| |||||||||||| ||||||| | Sbjct 1580064 GAGGCCTCCTTCTGGACGGCGGAGGAGATGGATCTGTCCAAGGACCTCCACGACTGGAAC 1580005 Query 116720 ---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCC 116776 ||| | |||||| | ||||| || |||||| ||||| || ||||| ||||| || Sbjct 1580004 AACCGCCTCAACGACGATGAGCGTCACTTCATCTCCCACGTCCTCGCCTTCTTCGCTGCG 1579945 Query 116777 AGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCC 116836 ||| || |||||||||||||| || |||||||||||| | | ||||| |||| || Sbjct 1579944 TCCGATGGTATCGTCAACGAGAACCTCGTCGAGCGTTTCTCCAACGAGGTCCAGGCCGCG 1579885 Query 116837 GAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTAT 116896 ||||| || ||||||||||| || || ||| ||||||||| | ||||| || | || Sbjct 1579884 GAGGCACGCTGCTTCTACGGTTTCCAAATCATGATGGAGAACATTCACTCCGAGACCTAC 1579825 Query 116897 TCGACCCTCATCGACACGTACGT---GCGCTCTTCGGAG-GAGAAGCTCCGTTTGTTGAA 116952 || |||||||||||| ||| | | | || | || | ||| | | | || | Sbjct 1579824 TCCCTCCTCATCGACACCTACATCAAGGACCCTCAGCAGCGCGAA--TAC--CTCTTCGA 1579769 Query 116953 CGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGC 117012 ||||| || ||||| || ||| |||| |||||||||| ||||| || || |||||| Sbjct 1579768 TGCCATTGACACGATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTCTTCGTTGGATCAG 1579709 Query 117013 CGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTT 117072 || || |||| ||||| | ||||| || || ||||| || ||||||||||| |||| Sbjct 1579708 CGACAAGGAGGTTGCCTTTGCGGAGCGTCTCGTCGCCTTTGCCGCCGTCGAGGGTATCTT 1579649 Query 117073 CTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCT 117132 ||| |||||| |||||| |||| || ||||| ||||| || ||||||||| |||| || Sbjct 1579648 CTTCTCGGGCTCGTTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTCATG-CCGGTCT 1579590 Query 117133 GACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTT 117192 || ||| ||||||||||||||| | ||||||||| |||| |||||||| || || Sbjct 1579589 CACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTATGCACACGGACTTTGCGTGCTT 1579530 Query 117193 GCTGTTCAAGCATTTGGTGCAGCG-ACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCG 117251 ||| |||| || || | ||| || | || | | | || | |||| |||| | Sbjct 1579529 GCTCTTCAGCCACCTGAAGAGGCGCCCCCACTTCGACAC-CATCCGCATGATCATCACGG 1579471 Query 117252 ACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 | |||||| |||| |||||| |||||||| Sbjct 1579470 AGGCGGTCACCATTGAGCAGGAGTTCCTCAC 1579440 Score = 273 bits (302), Expect = 2e-68 Identities = 409/575 (71%), Gaps = 7/575 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||| | || ||||| ||||| || |||||| | ||||| Sbjct 1581365 ATATGGCAGATGTACAAGCGAGCCCAAGCCTCGTTTTGGACAGTGGAGGAGATTGACCTC 1581424 Query 116696 TCCAAGGACACGAGCGACTGGGA---GCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || | ||| | |||||| | | | | | | |||||||| |||||| | Sbjct 1581425 TCGCACGACCTCTGGGACTGGAACGGGAGACTCACCCCAAACGAGCGGCATTTCCTGTCC 1581484 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 | || || ||||| ||||||||| ||||| ||||| |||||||| || |||||||| Sbjct 1581485 TATGTCCTCGCCTTCTTCGCCGCCTCAGACGGTATCGTGAACGAGAACCTTGTCGAGCGG 1581544 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || || |||| || ||||| || |||||||||||||||||||| || Sbjct 1581545 TTCTCGAATGAAGTCCAGGCCGCGGAGGCCCGCTGCTTCTACGGCTTTCAGATAATGATC 1581604 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 || ||||||||||| || | ||||| |||||| ||||| ||| | | | | Sbjct 1581605 GAAAACGTGCACTCTGAGACCTATTCCCTCCTCATTGACACCTACATCAAGGATCCCGCC 1581664 Query 116933 GAGAAGCTCCGTT-TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGA 116991 ||| | || | | || ||||||||||||| || || ||| |||| ||||||| || Sbjct 1581665 GAGC-GTACCTTCCTCTTCGACGCCATCGAGACCATCCCATGCATCAAGAAGAAGGCAGA 1581723 Query 116992 GTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCC-GCCTTCGGCGAGCGCCTGGTGGCCT 117050 ||||| || |||||||| | | | ||| | | | |||| ||||| || || |||| Sbjct 1581724 CTGGGCACTCCGCTGGATATCTGAC-GAGCGCTCAGTGTTCGCTGAGCGGCTCGTTGCCT 1581782 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110 |||| ||||||||||| ||||||| || || |||||| |||| || ||| |||||| Sbjct 1581783 TCGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCATTCGCCTCCATCTTCTGGATCAAGA 1581842 Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170 | ||||| || ||||||||||| || || |||||||||||| | | |||||||| Sbjct 1581843 AGCGCGGGCTAATGCCCGGCCTCACATTTTCGAACGAGCTCATCAGCCGCGACGAGGGGA 1581902 Query 117171 TGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 |||| ||||| |||||| | || ||| | ||| Sbjct 1581903 TGCACACTGACTTCGCCTGTCTTCTCTTCCATCAT 1581937 Score = 82.4 bits (90), Expect = 8e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 117325 GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAA 117384 ||||| ||||||||||||||||| |||||| | |||||| ||| ||| | | ||| Sbjct 1582117 GATGTGTCAATACATCGAGTTCGTGGCCGACCGACTGCTGGTCGCGCTTGGAAATGACAA 1582176 Query 117385 GCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 |||||||||| || | |||||| | ||||| ||| || | || || Sbjct 1582177 GCACTACAACGCGACGAACCCGTTCGACTTCATGGACATGATATC 1582221 >seq62 Length=3011317 Score = 145 bits (160), Expect = 8e-30 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| |||||||| || |||||||||||||| || ||||| | || |||||| | | Sbjct 734967 ATGCAGATATTCGTGAAGACGCTCACGGGCAAGACGATCACGTTGGAGGTCGAATCTTCG 734908 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || |||| || || ||||| || || | ||||| Sbjct 734907 GACACGATCGACAACG-TGAAGGCGAAGATTCAGGATAAGGAGGGTATTCCGCCAGACCA 734849 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||||| ||||||||| |||||||| |||| |||||| ||| || ||||| Sbjct 734848 ACAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGGCGCACGCTCTCGGATTACAA 734789 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||| ||| |||||| ||||| Sbjct 734788 CATCCAGAAAGAGAGCACGCTTCATCT 734762 Score = 129 bits (142), Expect = 6e-25 Identities = 155/208 (75%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || ||| | |||||||| || |||||| |||| ||||| | | Sbjct 735532 AATGCAGATCTTCGTCAAGACGTTGACGGGCAAGACTATCACCCTCGAGGTCGAGTCGTC 735473 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 || | | | | |||| |||||| || |||| ||||| |||||||| || | |||| Sbjct 735472 GGATACCATCGACAACG-TCAAGGCGAAGATTCAAGACAAGGAGGGCATTCCGCCTGACC 735414 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 ||||||| || |||| ||| || || || ||||| || | |||||| | ||||||| Sbjct 735413 AGCAACGTCTTATCTTCGCCGGTAAGCAACTGGAGGATGGTCGCACCTTGTCGGACTACA 735354 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||| ||||||||| | ||||| || || Sbjct 735353 ACATTCAGAAGGAGTCAACGCTTCACCT 735326 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| |||| ||||| || | |||| ||||||||| ||||| || |||| || | Sbjct 735656 GCATCCCCCCGGATCAGCAGCGCTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGTCGTA 735597 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGG 40912 ||||| |||||||||||| ||||||||| | || || || || || | ||| || | | Sbjct 735596 CCCTCTCCGACTACAACATTCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGCCTGCGTG 735537 Query 40913 GCGG 40916 |||| Sbjct 735536 GCGG 735533 >seq2 Length=1429897 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| || |||||| |||| ||||| || | Sbjct 256497 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 256556 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||| | || || | ||||| ||||||||||| | ||||| Sbjct 256557 GATACCATTGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCGCCTGACCA 256615 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| ||| ||||| ||||| || |||| ||||| || ||||||||| Sbjct 256616 GCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGACTACAA 256675 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||| ||||||||| | || || || || Sbjct 256676 CATTCAGAAGGAGTCAACCCTCCACCT 256702 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || |||||||| || || ||||| | || ||||| | | Sbjct 257057 AATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACTATCACGCTGGAGGTCGAGTCGTC 257116 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | |||| | |||| || || | ||||| ||||| |||||| |||| | Sbjct 257117 TGACACGATCGATAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCCCCGGATC 257175 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||||| ||||||||| ||||| || || | ||||| ||| || || | Sbjct 257176 AGCAGCGTCTCATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGCACGCTCTCGGATTATA 257235 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||||| ||| || || || || | ||| || | || || Sbjct 257236 ACATCCAGAAGGAGAGCACCCTCCACCTTGTCCTCCGCCTGCGTGGTGG 257284 Score = 114 bits (126), Expect = 1e-20 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| || ||||| |||| || || | | Sbjct 256778 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACGATCACTCTCGAGGTGGAGTCTTCG 256837 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| ||| |||| || || ||||| || ||| ||||||| Sbjct 256838 GACACCATCGACAACG-TCAAGGCAAAGATTCAGGATAAGGAGGGTATTCCCCCGGACCA 256896 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||||| || || ||||| || | ||||| || ||||||||| Sbjct 256897 GCAGCGGTTGATCTTTGCGGGTAAGCAACTGGAGGATGGCCGCACGCTGTCCGACTACAA 256956 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||| ||||||||| | || || ||||| Sbjct 256957 CATTCAGAAGGAGTCGACCCTTCATCT 256983 Score = 82.4 bits (90), Expect = 8e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 ||||||| | || ||||| || ||||||| ||| ||||| ||||| || |||| || | Sbjct 256310 GCATCCCTCCCGATCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTA 256369 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCT 40895 | || ||||||||||||||||||||| |||| || || || Sbjct 256370 CTCTTTCTGACTACAACATCCAGAAGGAGTCCACACTTCACCT 256412 >seq35 Length=1232546 Score = 105 bits (116), Expect = 7e-18 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| | || ||||| || || |||| ||||||||| ||||| || |||| |||| Sbjct 1141310 GCATCCCCCCCGATCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCA 1141369 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 | |||| |||||||||||||||||||||| | || || || || ||| | ||| Sbjct 1141370 CGCTCAGCGACTACAACATCCAGAAGGAGTCTACCCTTCACCTTGTGCTCCGC 1141422 >seq13 Length=1377620 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| | |||||||| || || || | ||| ||||| ||||| || |||| || | Sbjct 90888 GCATCCCCCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGTA 90829 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 | |||| |||||||||||||||||||||| |||| || || || ||| Sbjct 90828 CGCTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTG 90782 >seq117 Length=1514007 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/232 (69%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 116966 ATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCC 117025 || || ||| |||||| ||||| || ||| | |||||||||| | | || Sbjct 682021 ATACCCTGCATCAAAGCCAAGGCTGACTGGTGCTTTCGCTGGATCGAAGACCATGAACAA 682080 Query 117026 GCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGT 117085 | |||| | ||| | | || ||||| ||||| || || |||| || || | Sbjct 682081 CCTTTCGCCACCCGCATCATTGCGTTCGCCGCCGTTGAAGGAATCTTTTTCTCATCCTCC 682140 Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAG--CA 117143 || || |||||||| ||||| |||| ||||| |||||||| ||||| || ||| || Sbjct 682141 TTTGCTGCCATATTCTGGCTGAAGAGCCGCGGTCTCATGCCTGGCCT--CTGTCACTCCA 682198 Query 117144 ACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCT 117195 |||||||||| ||||||||||| ||||| || | |||| || || |||| Sbjct 682199 ACGAGCTCATTTCCAGGGACGAAGGTCTACACACCAACTTCGCATGCCTGCT 682250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218311246880