Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq2 158 1e-33 seq62 116 3e-21 seq35 86.0 5e-12 >seq2 Length=1429897 Score = 158 bits (174), Expect = 1e-33 Identities = 164/214 (77%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 118530 ACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 |||||| |||| || ||||| || ||||||||||| ||| | |||||| ||||| Sbjct 256706 ACCAAGGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTC 256647 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||| || |||||| ||||||| |||||||| || || || |||||||||||||| Sbjct 256646 GAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTG 256587 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || ||| || | || | ||| |||| | ||||||||||| ||| | ||| || Sbjct 256586 GATCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTT 256527 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 ||| |||||||| || ||||| ||||||||| || Sbjct 256526 GCCAGTCAGAGTCTTGACAAAGATCTGCATGCCT 256493 Score = 123 bits (136), Expect = 2e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| ||| || ||||| |||||| || || || || Sbjct 256974 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTGCTTACCC 256915 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || |||| | |||||||| || || || || |||||||| || ||| ||| || Sbjct 256914 GCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTTTGCCTTG 256855 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||||| ||| ||||||| || | ||| |||||||||||||| Sbjct 256854 ACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTCAGAGTC 256795 Query 118722 TTTACAAAAATCTGCATGGCT 118742 || ||||| ||||||||| || Sbjct 256794 TTGACAAAGATCTGCATGCCT 256774 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || || ||||| ||||| | ||||| |||||||||||| || || ||| | Sbjct 257249 CTCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 257190 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 |||||||||||||||||| || || || ||||||||||| || || || || | Sbjct 257189 GATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 257130 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||| | ||||||||| | || | || || || || || || || || Sbjct 257129 ATCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTCTTCCCCGTGAGGGTCTTGAC 257070 Query 118727 AAAAATCTGCAT 118738 ||||||||||| Sbjct 257069 GAAAATCTGCAT 257058 >seq62 Length=3011317 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || ||||||||||| || || ||||| |||||| || || || || Sbjct 735335 GTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGTTGCTTACCG 735394 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| ||||| ||||| || || || ||||||||||||||| ||| || || Sbjct 735395 GCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTG 735454 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||| |||| ||||||||||| ||| | || ||||| |||| || Sbjct 735455 ACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTCAACGTC 735514 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 735515 TTGACGAAGATCTGCAT 735531 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 |||||| || ||||||||||| | |||||| ||||| ||||| || || ||| | Sbjct 734776 CTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAA 734835 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 |||||| ||||| || || || || || |||||||| || ||| || || || | Sbjct 734836 GATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTTCGCCTTCACGTT 734895 Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726 |||| ||||||| |||||||| | || | ||| ||||| || || || || || Sbjct 734896 GTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCCGTGAGCGTCTTCAC 734955 Query 118727 AAAAATCTGCAT 118738 || |||||||| Sbjct 734956 GAATATCTGCAT 734967 >seq35 Length=1232546 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | |||||||| || || |||||||| ||||| | ||||| ||||| Sbjct 1141416 CACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTC 1141357 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGC 118635 |||||| || || ||| |||| || |||||||||||||| || |||| Sbjct 1141356 GAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGC 1141310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433829670351496