Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2 118 7e-22 seq62 87.8 1e-12 seq13 86.0 4e-12 >seq2 Length=1429897 Score = 118 bits (130), Expect = 7e-22 Identities = 145/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||| || || |||| || | ||||||||| ||||| Sbjct 256687 TCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAG 256628 Query 34259 ATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 ||||| ||||||||||| | |||| | || ||||||||| ||||| ||||| | | Sbjct 256627 ATGAGGCGCTGCTGGTCAGGCGGG-ATGCCCTCCTTGTCCTGGATCTTG-GCTTTGACGT 256570 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | || | ||| | || ||||| || | ||||| || ||||| || ||||| || | Sbjct 256569 TGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAGAGTCTTGA 256510 Query 34377 CAAAGATCTGCAT 34389 ||||||||||||| Sbjct 256509 CAAAGATCTGCAT 256497 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||||||||||||| ||| | || |||| ||||| || || || Sbjct 256968 TCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTGCTTACCCGCAAAG 256909 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | |||||||||||| ||| | | |||||| || |||||| ||| | | | Sbjct 256908 ATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTTTGCCTTGACGTTG 256849 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | || || || || | ||||| || |||||||| ||||| || ||| Sbjct 256848 TCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACA 256789 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 256788 AAGATCTGCAT 256778 >seq62 Length=3011317 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 || ||||| ||||||||||| ||| || || || | || |||| ||||| || ||||| Sbjct 735341 TCCTTCTGAATGTTGTAGTCCGACAAGGTG-CGACCATCCTCCAGTTGCTTACCGGCGAA 735399 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || || |||||||| || | || ||||||||| ||||| ||| | | Sbjct 735400 GATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTGACGTT 735459 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | ||| | ||| ||||| || | ||||| || ||||| || | || || || Sbjct 735460 GTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTCAACGTCTTGAC 735519 Query 34378 AAAGATCTGCAT 34389 ||||||||||| Sbjct 735520 GAAGATCTGCAT 735531 >seq13 Length=1377620 Score = 86.0 bits (94), Expect = 4e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | || || ||||| |||||||||||| ||| |||| |||| Sbjct 90780 AGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCGTCC 90839 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCT 34287 || | ||||||||| |||||||| || |||||||||||| ||| | ||| Sbjct 90840 TCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGCT 90889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071456633280