Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq51 102 2e-16 seq117 87.8 4e-12 >seq51 Length=3165537 Score = 102 bits (112), Expect = 2e-16 Identities = 161/226 (71%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAG-CAATAACGAT---TTGG 101906 |||||||||||||| | |||||| || |||||| || | ||| | | | || | Sbjct 1579747 CATCAAGAAGAAGGCCGACTGGGCTCTTCGTTGGAT-CAGCGACAAGGAGGTTGCCTTTG 1579689 Query 101907 CGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCAT 101966 |||| | | || |||||||| || || || || |||||||| || | ||||| | Sbjct 1579688 CGGAGCGTCTCGTCGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCTCGTTCGCCT 1579629 Query 101967 CCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCA 102026 |||| |||||| | ||||| | || | |||| |||||||||| |||||| ||| ||| Sbjct 1579628 CCATCTTCTGGCTGAAGAAGCGTGGCCTCATGCC-GGTCTCACCTTCTCCAACGAGCTCA 1579570 Query 102027 TTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 | ||| | ||||| ||| | || |||||||| ||| |||| || Sbjct 1579569 TCTCTCGTGACGAGGGTATGCACACGGACTTTGCGTGCTTGCTCTT 1579524 >seq117 Length=1514007 Score = 87.8 bits (96), Expect = 4e-12 Identities = 112/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTT-TAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||| || || || |||||||||||||| || | | | | || || |||| |||||| Sbjct 682100 TTGCGTTCGCCGCCGTTGAAGGAATCTTTTTCTCATCCTCCTTT-GCTGCCATATTCTGG 682158 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | |||| | | ||| | ||||||| ||| |||||| ||| ||||||| |||||| Sbjct 682159 CTGAAGAGCCGCGGTCTCATGCCTGGCCTCTGTCACTCCAACGAGCTCATTTCCAGGGAC 682218 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCT 102069 |||||||| || | |||| |||||| |||| Sbjct 682219 GAAGGTCTACACACCAACTTCGCATGCCTGCT 682250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989582250291790