Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq62 96.9 3e-15 >seq62 Length=3011317 Score = 96.9 bits (106), Expect = 3e-15 Identities = 165/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296 |||||||| || |||| ||| ||||| |||||| || ||||| ||| ||||| Sbjct 1922496 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAAG 1922555 Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCC 21356 || ||||||||||| ||||| || || || || ||||| ||||| || | ||||| || Sbjct 1922556 TGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCCA 1922615 Query 21357 TGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCG-CGA 21415 || | | | || | |||||||| | ||||||| || || ||||| | || ||| Sbjct 1922616 CGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCC-CTTCGCCGA 1922674 Query 21416 CAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCC 21472 || | | | ||| ||| | || | | ||||| || | |||||| |||| ||| Sbjct 1922675 GAGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGATGCC 1922731 Score = 93.3 bits (102), Expect = 4e-14 Identities = 162/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296 |||||||| || |||| ||| ||||| |||||| || ||||| ||| ||||| Sbjct 1913228 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAAG 1913169 Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCC 21356 || ||||||||||| ||||| || || || || ||||| ||||| || | ||||| || Sbjct 1913168 TGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCCA 1913109 Query 21357 TGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCCGCGGCGCGAC 21416 || | | | || | |||||||| | ||||||| || || ||||| ||| Sbjct 1913108 CGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCTTTCGCCGAG 1913049 Query 21417 AGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCC 21472 || | | | ||| ||| | || | | ||||| || | |||||| |||| ||| Sbjct 1913048 AGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGATGCC 1912993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775280534240