Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq62 87.8 2e-12 seq51 82.4 8e-11 >seq62 Length=3011317 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| ||| ||||| || |||||||| || || || |||| || || || || Sbjct 735328 GTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGTTG 735387 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 ||||| || |||| ||||||||||| || || || ||||| || ||||| ||| | | Sbjct 735388 CTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTC-TTGAATCT 735446 Query 139681 TTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739 | | || | | || | || || | | ||| ||||| | ||| | |||||||| | Sbjct 735447 TCGCCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCCG 735506 Query 139740 TCAACGTTTTTACGAATATTTGCAT 139764 ||||||| || ||||| || ||||| Sbjct 735507 TCAACGTCTTGACGAAGATCTGCAT 735531 >seq51 Length=3165537 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 52870 GACGCTTTACCCGTATCATTGTTGGGCATGAACGCGACCA--TGATGTGCGAGTACATCG 52927 || ||| |||| ||||| | | ||||||||||| ||| ||||||| | ||||||| Sbjct 1582076 GAGGCTCTACCGGTATCGCTCATAGGCATGAACGC--CCAGTTGATGTGTCAATACATCG 1582133 Query 52928 AGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGTCAGCCGAAATACTATAATGCGCGTA 52987 |||| || || ||| ||||| || | ||| || | || |||| || ||| | Sbjct 1582134 AGTTCGTGGCCGACCGACTGCTGGTCGCGCTTGGAAATGACAAGCACTACAACGCGACGA 1582193 Query 52988 ACCCCTTTTCGTTTATGAACAACATATCGCTCGAGGGCAAAACAAACTTTTTCGAGAGAC 53047 |||| || || ||| ||| |||||||| | ||||| || ||||| ||||||| | Sbjct 1582194 ACCCGTTCGACTTCATGGACATGATATCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGC 1582253 Query 53048 GTGTGGGCGAGTA 53060 | ||| |||||| Sbjct 1582254 GCGTGTCCGAGTA 1582266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063144289600