Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq51 233 3e-56 >seq51 Length=3165537 Score = 233 bits (258), Expect = 3e-56 Identities = 407/585 (70%), Gaps = 13/585 (2%) Strand=Plus/Minus Query 124994 CCTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTT 125053 ||| || |||||| || || || || ||| | ||||||||||||||| |||||||||| Sbjct 1580113 CCTCTTCCCCATCCAATACCACGAAATCTGGCAGATGTACAAAAAGGCTGAGGCCTCCTT 1580054 Query 125054 TTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGAC 125113 ||||||| || ||| | ||||||||||||||||| |||| ||| | | || | | Sbjct 1580053 CTGGACGGCGGAGGAGATGGATCTGTCCAAGGACCTCCACGACTGGAACAACCGCCTCAA 1579994 Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 || |||||| | || || || ||| | | |||||||| || | |||||||| || Sbjct 1579993 CGACGATGAGCGTCACTTCATCTCCCACGTCCTCGCCTTCTTCGCTGCGTCCGATGGTAT 1579934 Query 125174 CGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTC--CAGAGGTGTC 125230 ||||||||| || || || || || ||||| | ||| | ||| | | |||| Sbjct 1579933 CGTCAACGAGAACCTCGTCGA-GCGTTTCTCCAACGAG--GTCCAGGCCGCGGAGGCACG 1579877 Query 125231 GTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACT 125290 ||||| ||||| |||||||||||||| |||||| | ||||| || | ||||| || Sbjct 1579876 CTGCTTCTACGGTTTCCAAATCATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCT 1579817 Query 125291 GATTGACATGTACATTCGCGA---TCCGCAACGTAAACACATGCTCTTTAACGCAATCGA 125347 || |||| ||||| || || ||| || || || ||||| | || || || Sbjct 1579816 CATCGACACCTACATCAAGGACCCTCAGCAGCGCGAATAC---CTCTTCGATGCCATTGA 1579760 Query 125348 CACGGTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAA 125407 |||| | || | || || ||||| | |||| |||| |||||| ||| | | Sbjct 1579759 CACGATCCCTTGCATCAAGAAGAAGGCCGACTGGGCTCTTCGTTGGATCAGCGACAAGGA 1579700 Query 125408 GTCTTCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG 125467 | | | | || || | || || || || |||||||| ||||| |||||||| ||||| Sbjct 1579699 GGTTGCCTTTGCGGAGCGTCTCGTCGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGG 1579640 Query 125468 TAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAG 125527 || || ||||||| ||||| |||||||| || |||||| |||| || || | Sbjct 1579639 CTCGTTCGCCTCCATCTTCTGGCTGAAGAAGCGTGGCCTCATG-CCGGTCTCACCTTCTC 1579581 Query 125528 TAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 |||||| | || ||||| |||||||| | ||| |||||||| Sbjct 1579580 CAACGAGCTCATCTCTCGTGACGAGGGTATGCACACGGACTTTGC 1579536 Score = 140 bits (154), Expect = 5e-28 Identities = 403/608 (66%), Gaps = 34/608 (6%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| || || ||||| |||||||| || || ||| | || || Sbjct 1581365 ATATGGCAGATGTACAAGCGAGCCCAAGCCTCGTTTTGGACAGTGGAGGAGATTGACCTC 1581424 Query 125079 TCCAAGGACCTGTACGATTGG-----GAGACTCGTTTGACTGAAACTGAGCGAGAGTTTA 125133 || | ||||| | || ||| ||||||| | |||| ||||| | || Sbjct 1581425 TCGCACGACCTCTGGGACTGGAACGGGAGACTCAC----CCCAAAC-GAGCGGCATTTCC 1581479 Query 125134 TATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTG 125192 | || | | | |||||||| |||| ||| || || ||||| ||||| || || || | Sbjct 1581480 TGTCCTATGTCCTCGCCTTCTTCGCCGCCTCAGACGGTATCGTGAACGAGAACCTTGTCG 1581539 Query 125193 ACACGATTCTCTCAAGAGTTGACCATTCCA--GAGGTGTCGTGCTTTTACGGATTCCAAA 125250 | || ||||| | || | ||| || |||| ||||| ||||| || || | Sbjct 1581540 AG-CGGTTCTCGAATGAAGT--CCAGGCCGCGGAGGCCCGCTGCTTCTACGGCTTTCAGA 1581596 Query 125251 TCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCG 125310 | ||||| || ||||||||||| || | || || || ||||||| ||||| | Sbjct 1581597 TAATGATCGAAAACGTGCACTCTGAGACCTATTCCCTCCTCATTGACACCTACATCAAGG 1581656 Query 125311 ATCC-GC--AACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTA 125367 |||| || | |||| | | ||||| |||| ||||| || | || | || | Sbjct 1581657 ATCCCGCCGAGCGTAC---CTTCCTCTTCGACGCCATCGAGACCATCCCATGCATCAAGA 1581713 Query 125368 AAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGAC 125427 | ||||| | |||| | || ||||| |||||| || || ||| || | | Sbjct 1581714 AGAAGGCAGACTGGGCACTCCGCTGGATATCTGACGAGCGCTCAGTGTTCGCTGAGCGGC 1581773 Query 125428 TGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTT 125487 | || || ||||||||||| ||||| |||||||| || ||| || || ||||||| | Sbjct 1581774 TCGTTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCATTCGCCTCCATCTTCT 1581833 Query 125488 GGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT----AACGAGTTTATATCT 125543 || ||||||||||||| || |||||||| || |||| | |||||| | || Sbjct 1581834 GGATCAAGAAGCGCGGGCTAATGCCCGGCCT----CACATTTTCGAACGAGCTCATCAGC 1581889 Query 125544 CGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTC-C 125602 || |||||||| | ||| |||||| ||| ||| || || | | |||| |||| | Sbjct 1581890 CGCGACGAGGGGATGCACACTGACTTCGCCTGTCTTCTCTT---CCATCATCTCCGTCGC 1581946 Query 125603 CGAGTGCA 125610 |||| ||| Sbjct 1581947 CGAGCGCA 1581954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057921672880