Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2 120 7e-22 seq62 102 2e-16 >seq2 Length=1429897 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | || || || |||||||| || ||||| || || || | || || || ||| Sbjct 256983 AGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGT 256924 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || || ||||| || | || ||| || || || || || || || |||||||||||| Sbjct 256923 TGCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATC 256864 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 ||||| || || || || | ||| || || || ||||| || || || ||||| || Sbjct 256863 TTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCG 256804 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| |||||||| Sbjct 256803 GTCAGAGTCTTGACAAAGATCTGCAT 256778 >seq62 Length=3011317 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 |||||||| || || || || || || || | ||||| || || || || || || || Sbjct 734777 TCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAG 734836 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | |||||| || || || || || || |||||||||||||| || || || || Sbjct 734837 ATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTTCGCCTTCACGTTG 734896 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || || ||| ||||| | || || ||||| || || || || || || Sbjct 734897 TCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCCGTGAGCGTCTTCACG 734956 Query 104549 AATATCTGCAT 104559 ||||||||||| Sbjct 734957 AATATCTGCAT 734967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151396364183704