Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20]
138 sequences; 53,434,618 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq62 104 2e-17
>seq62
Length=3011317
Score = 104 bits (114), Expect = 2e-17
Identities = 160/226 (71%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 25738 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGAA 25796
||||| || || ||| | |||| |||||| || | || |||| ||||| || || ||
Sbjct 1922496 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCA-GTCCTCGTACTTCGCGCCAAA 1922554
Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856
| |||||||||||| ||||| || || || ||||| || || | ||| | | ||
Sbjct 1922555 GTGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCC 1922614
Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916
| ||| || | || || |||| || || ||||||| ||||| || |||||| | ||
Sbjct 1922615 ACGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCCTTCGCCGA 1922674
Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962
||||| || | || |||| | || | |||||||| || ||||||
Sbjct 1922675 GAGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCC 1922720
Score = 98.7 bits (108), Expect = 7e-16
Identities = 159/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 25738 AGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGTACTCTGCTCCGAA 25796
||||| || || ||| | |||| |||||| || | || |||| ||||| || || ||
Sbjct 1913228 AGCTGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCA-GTCCTCGTACTTCGCGCCAAA 1913170
Query 25797 ATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCC 25856
| |||||||||||| ||||| || || || ||||| || || | ||| | | ||
Sbjct 1913169 GTGCCTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCC 1913110
Query 25857 CCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGA 25916
| ||| || | || || |||| || || ||||||| ||||| || || ||| | ||
Sbjct 1913109 ACGCTTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCTTTCGCCGA 1913050
Query 25917 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962
||||| || | || |||| | || | |||||||| || ||||||
Sbjct 1913049 GAGCTGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCC 1913004
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137027931074
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |