Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 seq62 84.2 2e-11 >seq2 Length=1429897 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| || |||||| ||||||||||| || | || || | |||||||| || Sbjct 256981 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTG 256922 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| | | || || |||||||| ||| || | || ||||| ||| ||| || Sbjct 256921 CTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTT 256862 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 ||||| | | || ||||| || | ||||||| ||||| || || || || ||| Sbjct 256861 TGCCTTGACGTTGTCG--ATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCG 256804 Query 48701 GTGAGAGTTTTCACAAAAATCTGCAT 48726 || ||||| || ||||| |||||||| Sbjct 256803 GTCAGAGTCTTGACAAAGATCTGCAT 256778 >seq62 Length=3011317 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| |||||||| || || ||||||||||| | | ||| ||||||||||||| Sbjct 734764 ATGAAGCGTGCTCTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTG 734823 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 ||| || || | || | ||||| || || ||| | || ||||| ||| ||| || Sbjct 734824 CTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTT 734883 Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700 | ||| | | | || || || || | ||| || ||| | || || || || || Sbjct 734884 CGCCTTCACGTTGTCG--ATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCC 734941 Query 48701 GTGAGAGTTTTCACAAAAATCTGCATC 48727 ||||| || ||||| || ||||||||| Sbjct 734942 GTGAGCGTCTTCACGAATATCTGCATC 734968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421250491508138