Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq53 87.8 9e-13 seq51 87.8 9e-13 seq54 86.0 3e-12 seq63 84.2 1e-11 seq47 82.4 4e-11 seq1 82.4 4e-11 >seq53 Length=733768 Score = 87.8 bits (96), Expect = 9e-13 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 11448 AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTC 11507 |||| ||||||| | | |||||||||| ||||||| ||||||||||||| |||||| Sbjct 40537 AATCGCATTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTC 40478 Query 11508 TRACCAACTGAGCTAATGGGCC 11529 | ||||||||||||| | |||| Sbjct 40477 TAACCAACTGAGCTAGTCGGCC 40456 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| | || Sbjct 22125 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGTCGG 22066 Query 11528 CC 11529 || Sbjct 22065 CC 22064 >seq51 Length=3165537 Score = 87.8 bits (96), Expect = 9e-13 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 11453 AATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACC 11512 |||||||| | | |||||||||| ||||||| ||||||||||||| ||||||| ||| Sbjct 3047948 AATTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACC 3047889 Query 11513 AACTGAGCTAATGGGCC 11529 |||||||||| | |||| Sbjct 3047888 AACTGAGCTAGTCGGCC 3047872 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| | || Sbjct 3004699 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGTCGG 3004758 Query 11528 CC 11529 || Sbjct 3004759 CC 3004760 >seq54 Length=666141 Score = 86.0 bits (94), Expect = 3e-12 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||| | | |||||||||| ||||||| ||||||||||||| ||||||| |||| Sbjct 478146 ATTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCA 478205 Query 11514 ACTGAGCTAATGGGCC 11529 ||||||||| | |||| Sbjct 478206 ACTGAGCTAGTCGGCC 478221 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| | || Sbjct 472508 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGTCGG 472449 Query 11528 CC 11529 || Sbjct 472448 CC 472447 >seq63 Length=534024 Score = 84.2 bits (92), Expect = 1e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 11447 AAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCT 11506 ||| || | ||||| | | |||||||||| ||||||| ||||||||||||| ||||| Sbjct 486691 AAAGCATACTGGCCAACGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCT 486632 Query 11507 CTRACCAACTGAGCTAATGGGCC 11529 || ||||||||||||| | |||| Sbjct 486631 CTAACCAACTGAGCTAGTCGGCC 486609 >seq47 Length=875365 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| | || Sbjct 599327 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGTCGG 599386 Query 11528 CC 11529 || Sbjct 599387 CC 599388 >seq1 Length=3841264 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| | || Sbjct 73425 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGTCGG 73484 Query 11528 CC 11529 || Sbjct 73485 CC 73486 Lambda K H 0.639 0.410 0.922 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261490760204488