Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2 107 2e-18 seq62 82.4 7e-11 >seq2 Length=1429897 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| || ||| || ||| | ||||||||| || || || Sbjct 256974 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTGCTTACCC 256915 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| || | ||||| || || |||||||| || || || | ||| ||||||||| Sbjct 256914 GCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTTTGCCTTG 256855 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| | ||| ||||| | || || || | ||||| || || || || ||||| Sbjct 256854 ACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTCAGAGTC 256795 Query 94991 TTCACAAAGATCTGCATGC 95009 || |||||||||||||||| Sbjct 256794 TTGACAAAGATCTGCATGC 256776 >seq62 Length=3011317 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || || | ||||| | | || || ||||| |||||||| || || Sbjct 734813 TCCTCCAGCTGCTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTA 734872 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| || ||||| ||| | ||| ||||| | ||||| || | |||||| Sbjct 734873 TCCTGAATCTTCGCCTTCACGTTGTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATC 734932 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || || || ||||| || |||||||| Sbjct 734933 GTCTTGCCCGTGAGCGTCTTCACGAATATCTGCAT 734967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290426697680