Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq84 120 5e-23 seq51 107 3e-19 >seq84 Length=2527944 Score = 120 bits (132), Expect = 5e-23 Identities = 120/153 (78%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| ||| |||| |||||| || |||||||| || ||||| ||||| || || Sbjct 1073113 GCTAAGCGTCACCGCAAGAT-TCTTCGCGACAACATCCAGGGTATCACGAAGCCCGCCAT 1073171 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| || |||||||| || ||||||||| |||| || | |||| || |||| Sbjct 1073172 TCGCCGTCTTGCGCGTCGTGGCGGTGTCAAGCGTATCTCCGGCCTCATCTACGAGGAGAC 1073231 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 |||| ||| | ||||||||||| ||| ||| Sbjct 1073232 CCGTGGTGTCCTTAAGATCTTCCTTGAGAACGT 1073264 Score = 102 bits (112), Expect = 1e-17 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| |||||||| ||||| || ||||||||||| || |||||| |||| Sbjct 758614 AGGTATCACCAAGCCCGCTATCCGCCGTCTCGCCCGTCGTGGTGGTGTGAAGCGTATCTC 758673 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584 || | |||| || |||| |||| ||| | |||||||||||| ||| ||| Sbjct 758674 CGGCCTCATCTACGAGGAGACCCGTGGTGTCCTCAAGATCTTCCTCGAGAACGT 758727 >seq51 Length=3165537 Score = 107 bits (118), Expect = 3e-19 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 |||||||| ||||| || ||||||||||| ||||||||| ||||||| ||| |||| || Sbjct 308851 GCTATCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTGGCTTGATCTACGAG 308910 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 || | || | |||| | |||||||||||| ||| ||| |||| || || || || Sbjct 308911 GAAACCCGCGGTGTTCTCAAGATCTTCCTCGAGAACGTCATCCGCGACTCTGTCACGTAC 308970 Query 16607 ACCGAGCACGCTAA 16620 || |||||||| || Sbjct 308971 ACTGAGCACGCGAA 308984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075073825634