Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq51 145 1e-29 >seq51 Length=3165537 Score = 145 bits (160), Expect = 1e-29 Identities = 385/583 (66%), Gaps = 9/583 (2%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || || || || ||||| ||||||||| | | || || |||||||| || || Sbjct 1579529 CAAGCACGCAAAGTCCGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGT 1579588 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||| |||| ||| ||||||||||| || ||||| || ||||| ||||| || || || || Sbjct 1579589 GAGACCGG-CATGAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAA 1579647 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTC 33476 |||||| || || || || |||||||| | || | ||| || | | | | |||| Sbjct 1579648 GAAGATACCCTCGACGGCGGCAAAGGCGACGAGACGCTCCGCAAAGGCAACCTCCTTGTC 1579707 Query 33477 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33536 ||||| ||||||| ||||||||||| || | ||||| ||||| || ||||| Sbjct 1579708 GCTGATCCAACGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCAATGGC 1579767 Query 33537 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33596 || ||||| || | | | | || || | || || ||||| | || || Sbjct 1579768 ATCGAAGAGGTATTCGCGCTGCTGAGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTA 1579827 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 | || || |||||||| || || || || || |||||||| || | ||||| | Sbjct 1579828 GGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGTGCCTCCGC 1579887 Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 ||| || || | | || || || | | || || || || || || || || Sbjct 1579888 GGCCTGGACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGC 1579947 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTG-TTAGTTTAT 33772 || || || || | || || || || | | ||||| | || | || | Sbjct 1579948 AGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTC-GTTGAGGCGGTTGT 1580006 Query 33773 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 33832 |||| || | || || || || | ||| | || ||| | ||||| || || ||||| | Sbjct 1580007 TCCAGTCGTGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCAGAAGGAGGCCTCAG 1580066 Query 33833 CCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAA 33875 ||||||| ||||| | |||||| || | |||||||| ||||| Sbjct 1580067 CCTTTTTGTACATCTGCCAGATTTCGTGGTATTGGATGGGGAA 1580109 Score = 141 bits (156), Expect = 1e-28 Identities = 296/437 (68%), Gaps = 3/437 (1%) Strand=Plus/Minus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| ||||| || ||||| |||||||| | || || || ||||| ||||| ||||| Sbjct 1581922 ACAGGCGAAGTCAGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAG 1581863 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 ||||||||||| || ||||| || | ||| || ||||| |||||||| ||||| ||||| Sbjct 1581862 GCCGGGCATTAGCCCGCGCTTCTTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAA 1581803 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTC-TCCATAACCG-GCGCT-GTCATG 33479 ||| || || || || || ||||||| || | ||| | | || | ||||| |||| Sbjct 1581802 GATACCCTCGACGGCGGCGAAGGCAACGAGCCGCTCAGCGAACACTGAGCGCTCGTCAGA 1581743 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 |||||| | ||||| || |||||||| || | || || || || || ||||| | Sbjct 1581742 TATCCAGCGGAGTGCCCAGTCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTC 1581683 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 ||||| || | || ||| || | || || || || | || ||| | Sbjct 1581682 GAAGAGGAAGGTACGCTCGGCGGGATCCTTGATGTAGGTGTCAATGAGGAGGGAATAGGT 1581623 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 || || || | |||||| || |||||||| |||||||| || | ||||| | Sbjct 1581622 CTCAGAGTGCACGTTTTCGATCATTATCTGAAAGCCGTAGAAGCAGCGGGCCTCCGCGGC 1581563 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 ||| ||||| | | || || || | | || || ||||| || ||||| ||| || Sbjct 1581562 CTGGACTTCATTCGAGAACCGCTCGACAAGGTTCTCGTTCACGATACCGTCTGAGGCGGC 1581503 Query 33720 AAAAAACGCCAATACAT 33736 || || || | |||| Sbjct 1581502 GAAGAAGGCGAGGACAT 1581486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946125416080