Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 158 3e-33 >seq1 Length=3841264 Score = 158 bits (174), Expect = 3e-33 Identities = 414/626 (66%), Gaps = 12/626 (2%) Strand=Plus/Minus Query 364195 AAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATT 364254 || |||||||||||| || | ||||| || || ||| | || || ||||| || Sbjct 3253851 AAATCCAACCAGCAGAACGTCGGTACCATCAAGTCTTCGAACTTGTGCACTGAGATCATC 3253792 Query 364255 GAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCG 364314 || ||| | | || |||||||||||||| || |||||||||||||||||||||||| | Sbjct 3253791 GAGTACTCGTCGCCTGACGAGACTGCCGTTTGCAACCTTGCGTCGATCGCGCTTCCGTCC 3253732 Query 364315 TTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTA 364372 || | | ||||| | | || |||| | | | ||||| | | || | | Sbjct 3253731 TTCATCGAGGATGGCAAATACAACTTCCAGAAGTTGCACGACGTCGCGAAGGTCGT-CGC 3253673 Query 364373 CTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTT 364432 ||| ||| ||| || | ||||||||||| || ||||| || || || ||| || | Sbjct 3253672 CTT-CAACCTCAACCGCATCATCGACAAGAACTACTATCCCATCCCGGAGGCCCGTCGCT 3253614 Query 364433 CTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGA 364492 | || ||||||||||||||||| || ||||||| |||||||||||||||| || ||| Sbjct 3253613 CCAACATGCGTCATCGCCCGATCGGCGTTGGTGTGCAGGGCCTCGCTGACGCGTTCATGG 3253554 Query 364493 TGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAA 364552 ||| || | ||||| ||| | || || || || || ||||||| || | Sbjct 3253553 CCCTCCGCTTGCCGTTTGACTCGGCCGAAGCACGGAGGCTCAACCTTCAGATCTTCGAGA 3253494 Query 364553 CAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612 | || || ||| || || ||| || || |||| || | | || ||| Sbjct 3253493 CGATTTACCATGCTGCTGTGGAGGCTAGTTGCGAGATGGCGAAGAAGGACGGTCCCTACG 3253434 Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCA 364672 || || ||||| ||| ||| |||| || ||||||| ||||| ||| ||||| Sbjct 3253433 AGACCTACGAGGGTAGCCCCGCTTCTGAGGGCAAGCTCCAGTTCGATCTCTGGGGTGTCA 3253374 Query 364673 CGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTC 364732 | || | | || ||| | ||||| | || | || || || | ||| | Sbjct 3253373 CTCCCACCGACCTGTGGGATTGGGACAGCCTCAAGGCTAAGGTCGCCCAGTACGGTCTCC 3253314 Query 364733 GCAACTC---CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789 | ||||| ||| || || || ||||| || || || || ||||| ||||| | Sbjct 3253313 GGAACTCGTTGCTCCTT---GCACCTATGCCAACCGCGTCGACGAGCCAGATTCTCGGCA 3253257 Query 364790 ACAACGAGTGCTTCGAACCGTTTACA 364815 ||||||||||||| || || ||||| Sbjct 3253256 ACAACGAGTGCTTTGAGCC--TTACA 3253233 Score = 87.8 bits (96), Expect = 5e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 |||||||| || || | || |||||||| || || || ||| ||| || | |||||| Sbjct 3254393 GGATACTCCAACGGTATCGTCCCCATGCTCCGCGTCTTCGACTCTACCGCCCGCTACGTC 3254334 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||| ||||| |||||| || || || || || || | ||||| ||| | Sbjct 3254333 GACCAAGGTGGCAACAAGCGCCCTGGTGCATTCGCCATCTACTTGGAGCCGTGGCATCCG 3254274 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 || | || ||||| | || || || || ||| || || ||||| | || || ||| Sbjct 3254273 GACGTCTTCGAGTTCTTGGACCTGCGCAAGAACCATGGCAAGGAGGAGGTTCGCGCTCGT 3254214 Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || |||||||||| |||||| || | |||| Sbjct 3254213 GACTTGTTCTATGCCCTTTGGATTCCCGACC 3254183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351295507916