Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 122 8e-23 seq62 98.7 9e-16 seq35 89.7 5e-13 seq51 87.8 2e-12 seq13 82.4 7e-11 >seq2 Length=1429897 Score = 122 bits (134), Expect = 8e-23 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| ||||||||||| ||| | ||||| |||||| ||||||||||| Sbjct 256694 GGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCC 256635 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | ||||||||||| || ||||| || || ||||| ||| || || Sbjct 256634 AGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCTTT 256575 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | ||||| | |||||||| |||| ||| | || || || || ||||| Sbjct 256574 GACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAGAGT 256515 Query 131217 TTTTACGAAAATCTGCATGACT 131238 || || || ||||||||| || Sbjct 256514 CTTGACAAAGATCTGCATGCCT 256493 Score = 104 bits (114), Expect = 2e-17 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 131031 ATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTG 131090 ||| | |||||||||||| ||||||||||| ||| || ||||| ||||| || || Sbjct 256981 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTG 256922 Query 131091 CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTT 131150 ||| || || |||| || |||||||||||||| || || || || || || ||| | | Sbjct 256921 CTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATC-CTGAATCT 256863 Query 131151 CTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGG 131209 || ||||| | || | || || | ||||| | |||| || | || || |||| Sbjct 256862 TTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGG 256803 Query 131210 TTAGAGTTTTTACGAAAATCTGCATGACT 131238 | ||||| || || || ||||||||| || Sbjct 256802 TCAGAGTCTTGACAAAGATCTGCATGCCT 256774 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || || || | || | ||| |||||| || ||||| ||||| Sbjct 257284 CCACCACGCAGGCGGAGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAATCCGAG 257225 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||| ||||| ||| Sbjct 257224 AGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCCGGGGGG 257165 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | ||||||| Sbjct 257164 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTATCGATCGTGTCAGACGACTCGACC 257105 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || |||||||||||||| Sbjct 257104 TCCAGCGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 257058 >seq62 Length=3011317 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| ||||||||||| || || |||||| ||||| || ||||| || Sbjct 735335 GTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGTTGCTTACCG 735394 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | ||| |||||||| || || || || || ||||| || ||| |||| Sbjct 735395 GCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTG 735454 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | ||||||| |||| ||| | || || || || | || Sbjct 735455 ACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTCAACGTC 735514 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 735515 TTGACGAAGATCTGCAT 735531 Score = 89.7 bits (98), Expect = 5e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| ||||||||||| ||| | ||| || |||||| ||||||||||| Sbjct 735563 GTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTCCTCGAGCTGCTTGCCC 735622 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||| |||| || |||||||| ||||| ||||| Sbjct 735623 GCGAAGATCAAGCGCTGCTGATCCGGGGGGAT 735654 >seq35 Length=1232546 Score = 89.7 bits (98), Expect = 5e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | || | ||| |||||||| || |||||||| ||||| Sbjct 1141433 CCACCACGGAGGCGGAGCACAAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTG 1141374 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | |||||||| || || ||| Sbjct 1141373 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCGGGGGGG 1141314 Query 131128 AT 131129 || Sbjct 1141313 AT 1141312 >seq51 Length=3165537 Score = 87.8 bits (96), Expect = 2e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 46429 GGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTG 46488 ||||||||||| |||| ||||| | ||||||||||| || || ||||||||||| || Sbjct 1582100 GGCATGAACGCCCAGTTGATGTGTCAATACATCGAGTTCGTGGCCGACCGACTGCTGGTC 1582159 Query 46489 CAGCTTCACCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATC 46548 |||| | ||||| | ||||| || || || || || ||| ||| || Sbjct 1582160 GCGCTTGGAAATGACAAGCACTACAACGCGACGAACCCGTTCGACTTCATGGACATGATA 1582219 Query 46549 TCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTAT 46596 || ||| | ||||| || || || ||||| |||||||| ||||||| Sbjct 1582220 TCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGTGTCCGAGTAT 1582267 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/165 (72%), Gaps = 2/165 (1%) Strand=Plus/Plus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 ||||| ||||| | || ||||| || || ||||| |||| || ||||| || Sbjct 1581761 TTCGCTGAGCGGCTCGTTGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCATTC 1581820 Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265 ||| ||||||| | ||||| || | |||| | ||||||||||| || ||| ||||| Sbjct 1581821 GCCTCCATCTTCTGGATCAAGAAGCGCGGGC-TAATGCCCGGCCTCACATTTTCGAACGA 1581879 Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT 46310 ||| || ||||||||||| |||| || ||||| || ||||| Sbjct 1581880 GCTCATCAGCCGCGACGAGGGGATGCACACTGACTTCGCCTGTCT 1581924 >seq13 Length=1377620 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | || | ||| |||||||| || |||||||| ||||| | || || | Sbjct 90777 CGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTACGGCCG 90836 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||||| ||||||||||| ||| | || | ||||||||||| || ||||| Sbjct 90837 TCCTCAAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGAT 90886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011985777920