Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq51 129 7e-25 >seq51 Length=3165537 Score = 129 bits (142), Expect = 7e-25 Identities = 293/437 (67%), Gaps = 3/437 (1%) Strand=Plus/Minus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| ||||| || ||| | |||||||| | || || | ||||| ||||| ||||| Sbjct 1581922 ACAGGCGAAGTCAGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAG 1581863 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 ||||||||||| || ||||| || | ||| || ||||| || ||||| ||||| ||||| Sbjct 1581862 GCCGGGCATTAGCCCGCGCTTCTTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAA 1581803 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTC-TCCATAACCG-GCGCT-GTCATG 32836 || || || || || || ||||||| || | ||| | | || | ||||| |||| Sbjct 1581802 GATACCCTCGACGGCGGCGAAGGCAACGAGCCGCTCAGCGAACACTGAGCGCTCGTCAGA 1581743 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 |||||| | ||||| || |||||||| || | || || || ||||| || || | Sbjct 1581742 TATCCAGCGGAGTGCCCAGTCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTC 1581683 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 ||||| || | || ||| || | || || ||||| | || ||| | Sbjct 1581682 GAAGAGGAAGGTACGCTCGGCGGGATCCTTGATGTAGGTGTCAATGAGGAGGGAATAGGT 1581623 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 || || || | |||||| || || ||||| ||||||||||| | ||||| | Sbjct 1581622 CTCAGAGTGCACGTTTTCGATCATTATCTGAAAGCCGTAGAAGCAGCGGGCCTCCGCGGC 1581563 Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076 ||| ||||| | | || || || | | || || ||||| || ||||| ||| || Sbjct 1581562 CTGGACTTCATTCGAGAACCGCTCGACAAGGTTCTCGTTCACGATACCGTCTGAGGCGGC 1581503 Query 33077 AAAAAACGCCAATACAT 33093 || || || | |||| Sbjct 1581502 GAAGAAGGCGAGGACAT 1581486 Score = 122 bits (134), Expect = 1e-22 Identities = 380/583 (65%), Gaps = 9/583 (2%) Strand=Plus/Plus Query 32657 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 32716 ||| || || || || ||| | ||||||||| | | || | |||||||| || || Sbjct 1579529 CAAGCACGCAAAGTCCGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGT 1579588 Query 32717 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 32776 ||| |||| ||| ||||||||||| || ||||| || ||||| || || || || || || Sbjct 1579589 GAGACCGG-CATGAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAA 1579647 Query 32777 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTC 32833 ||| || || || || || |||||||| | || | ||| || | | | | |||| Sbjct 1579648 GAAGATACCCTCGACGGCGGCAAAGGCGACGAGACGCTCCGCAAAGGCAACCTCCTTGTC 1579707 Query 32834 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 32893 ||||| ||||||| ||||||||||| || | ||||| || || || || || Sbjct 1579708 GCTGATCCAACGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCAATGGC 1579767 Query 32894 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 32953 || ||||| || | | | | || || | || || || || | || || Sbjct 1579768 ATCGAAGAGGTATTCGCGCTGCTGAGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTA 1579827 Query 32954 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGT 33013 | || || |||||||| || || ||||| || ||||||||||| | ||||| | Sbjct 1579828 GGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGTGCCTCCGC 1579887 Query 33014 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 33073 ||| || || | | || || || | | || || || || || || || || Sbjct 1579888 GGCCTGGACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGC 1579947 Query 33074 TGCAAAAAACGCCAATACATGTTTTATAAA---ATATTTTTCGTCTGGTG-TTAGTTTAT 33129 || || || || | || || || || | | ||||| | || | || | Sbjct 1579948 AGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTC-GTTGAGGCGGTTGT 1580006 Query 33130 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 33189 |||| || | || || || || | ||||| || ||| | ||||| || || ||||| | Sbjct 1580007 TCCAGTCGTGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCAGAAGGAGGCCTCAG 1580066 Query 33190 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAA 33232 ||||||| ||||| | |||||| || || ||||| || || || Sbjct 1580067 CCTTTTTGTACATCTGCCAGATTTCGTGGTATTGGATGGGGAA 1580109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630906984800