Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq51 325 7e-84 seq1 105 1e-17 >seq51 Length=3165537 Score = 325 bits (360), Expect = 7e-84 Identities = 400/537 (74%), Gaps = 21/537 (4%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||||||||||||||| ||||| || || || |||||||| | | ||||| | Sbjct 1581491 CTCGCCTTCTTCGCCGCCTCAGACGGTATCGTGAACGAGAACCTTGTCGAGCGGTTCTCG 1581550 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || || ||| | ||||| ||||||||||||||||| |||||| || || ||| Sbjct 1581551 AATGAAGTCCAGGCCGCGGAGGCCCGCTGCTTCTACGGCTTTCAGATAATGATCGAAAAC 1581610 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCCCGTCGAG 42599 |||||||||||| || || || |||| |||| |||||| |||||||| |||| Sbjct 1581611 GTGCACTCTGAGACCTATTCC---CTCCTCATTGACACCTACATCAAGGATCCCGCCGAG 1581667 Query 42600 CGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGG 42659 |||| | || ||| | ||||| ||||| || || ||||||||||||||||| |||||| Sbjct 1581668 CGTACCTTCCTCTTCGACGCCATCGAGACCATCCCATGCATCAAGAAGAAGGCAGACTGG 1581727 Query 42660 GCGCTCAACTGGAT---CGA-GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 || ||| |||||| || ||| || | || ||||| ||| |||| || ||||| Sbjct 1581728 GCACTCCGCTGGATATCTGACGAG---CG-CTCAGTGTTCGCTGAGCGGCTCGTTGCCTT 1581783 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 ||||||||||||| ||||||||||| || | |||||||||||||||||| ||||| | Sbjct 1581784 CGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCATTCGCCTCCATCTTCTGGATCAAGAA 1581843 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 | | | |||||||| ||||| || |||||||| ||||||||| | ||||||||| | Sbjct 1581844 GCGCGGGCTAATGCCCGGCCTCACATTTTCGAACGAGCTCATCAGCCGCGACGAGGGGAT 1581903 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGC-ACAAGC-CCTCGAAG 42893 ||| | ||||| ||||| || || ||| || ||| | | | ||| | || | Sbjct 1581904 GCACACTGACTTCGCCTGTCTTCTCTTC---CATCATCTCCGTCGCCGAGCGCATC--CG 1581958 Query 42894 GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 || |||| | |||||| | |||||||| |||||||||||||||||| | ||| Sbjct 1581959 AAGAGGGTGGAGAAGATCATCGCCGAGGCCGTTGAGATCGAGAAGGAGTTCTTGACG 1582015 Score = 268 bits (296), Expect = 2e-66 Identities = 469/668 (70%), Gaps = 21/668 (3%) Strand=Plus/Minus Query 42292 ACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGA 42351 |||| || |||||| |||||||| ||||| || |||| |||||| || ||||||| Sbjct 1580096 ACCACGAAATCTGGCAGATGTACAAAAAGGCTGAGGCCTCCTTCTGGACGGCGGAGGAGA 1580037 Query 42352 TTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA-ACGAAAAGTTT--- 42407 | || ||| |||||||| || |||| | || | || | |||| || | Sbjct 1580036 TGGATCTGTCCAAGGACCTCCACGACTGGAACA-ACCGCCTCAACGACGATGAGCGTCAC 1579978 Query 42408 TTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTG 42467 ||| || || | || ||||||||||| || || || || || ||||| |||||||| Sbjct 1579977 TTCATCTCCCACGTCCTCGCCTTCTTCGCTGCGTCCGATGGTATCGTCAACGAGAACCTC 1579918 Query 42468 GCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAG 42527 | | | ||| || ||||| ||| | ||||| |||||||||||||| ||||| Sbjct 1579917 GTCGAGCGTTTCTCCAACGAGGTCCAGGCCGCGGAGGCACGCTGCTTCTACGGTTTCCAA 1579858 Query 42528 ATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTG 42587 || || |||||| | ||||| ||| ||| || || || |||| |||||| | Sbjct 1579857 ATCATGATGGAGAACATTCACTCCGAGACCTACTCCCTCCTCATCGACACCTACATCAAG 1579798 Query 42588 GATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAG 42647 || || |||| | || ||| | ||||| || ||||| || |||||||||||| Sbjct 1579797 GACCCTCAGCAGCGCGAATACCTCTTCGATGCCATTGACACGATCCCTTGCATCAAGAAG 1579738 Query 42648 AAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCT 42706 ||||| |||||||| || |||||| || | | | | | | || | ||| | || Sbjct 1579737 AAGGCCGACTGGGCTCTTCGTTGGATC-AGCGACAAGGAGGTTGCCTTTGCGGAGCGTCT 1579679 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || |||||| ||||||||||||| ||||||||||||||| | ||||||||||||||||| Sbjct 1579678 CGTCGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTG 1579619 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 ||| ||| || || || ||| |||| ||||||||||| ||||| |||||| | | Sbjct 1579618 GCTGAAGAAGCGTGGCCTC-ATG-CCGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTG 1579561 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT---CAGGCACA 42882 ||||||| |||| | ||||||||| ||| | || ||| |||||||| |||| | Sbjct 1579560 ACGAGGGTATGCACACGGACTTTGCGTGCTTGCTCTTC---AGCCACCTGAAGAGGCGCC 1579504 Query 42883 AGC-CCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAG 42941 | | |||| | | |||| |||||||||||||| || || ||| ||||| Sbjct 1579503 CCCACTTCGA--CACC--ATCCGCATGATCATCACGGAGGCGGTCACCATTGAGCAGGAG 1579448 Query 42942 TTCCTCAC 42949 |||||||| Sbjct 1579447 TTCCTCAC 1579440 >seq1 Length=3841264 Score = 105 bits (116), Expect = 1e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 245015 AAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCA 245074 ||||||||||| ||||| ||||| | ||| | ||| | | | ||| ||| |||| Sbjct 3254179 AAGAGGTCGGGAATCCAAAGGGCATAGAACAAGTCACGAGCGCGAACCTCCTCCTTGCCA 3254238 Query 245075 GTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACA 245134 |||||| | ||| ||||| || || |||||||| ||||| ||||||| ||||| Sbjct 3254239 TGGTTCTTGCGCAGGTCCAAGAACTCGAAGACGTCCGGATGCCACGGCTCCAAGTAGATG 3254298 Query 245135 GCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTGAAG 245194 |||| || || || ||||||||||| || ||||| || | || | || |||| Sbjct 3254299 GCGAATGCACCAGGGCGCTTGTTGCCACCTTGGTCGACGTAGCGGGCGGTAGAGTCGAAG 3254358 Query 245195 ATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTA 245247 | ||| || | || || || ||||| |||| || ||||| || |||||| Sbjct 3254359 ACGCGGAGCATGGGGACGATACCGTTGGAGTATCCATTGGTACCAGCGATGTA 3254411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337571014880