Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq62 113 4e-20 >seq62 Length=3011317 Score = 113 bits (124), Expect = 4e-20 Identities = 190/274 (69%), Gaps = 1/274 (0%) Strand=Plus/Minus Query 20486 TGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGC 20545 ||||| | |||| ||| || ||||| || || |||| ||||| ||| ||||||||| Sbjct 1913225 TGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAAGTGC 1913166 Query 20546 CTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGC 20605 ||||||||||| ||||| || || || | || || || | || ||| | || || ||| Sbjct 1913165 CTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCCACGC 1913106 Query 20606 CCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGC 20665 | ||||||||| |||| || || ||||||||||||||| ||| | || ||| Sbjct 1913105 TTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCTTTCGCCGAGAGC 1913046 Query 20666 TCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAA 20725 | | | | ||| || | || || ||||| || ||||| | || | ||| || Sbjct 1913045 TGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGATGCCGCGGAGG 1912986 Query 20726 AACACCCGCTTTGTGGTTAGTA-AGGGAAAGTGG 20758 ||| ||||| ||||| || | ||||| |||| Sbjct 1912985 AACGTACGCTTCGTGGTGAGCAGAGGGAGGGTGG 1912952 Score = 109 bits (120), Expect = 5e-19 Identities = 188/272 (69%), Gaps = 1/272 (0%) Strand=Plus/Plus Query 20486 TGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGC 20545 ||||| | |||| ||| || ||||| || || |||| ||||| ||| ||||||||| Sbjct 1922499 TGGTCGACGCCCTTGCCCGTGTAGTCCGCGTCGCAGTCCTCGTACTTCGCGCCAAAGTGC 1922558 Query 20546 CTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGC 20605 ||||||||||| ||||| || || || | || || || | || ||| | || || ||| Sbjct 1922559 CTCCACTGGAAGCCGTAGACGGGACCGAGGTCGCCTTCGCGTCGATGCCCGAGCCCACGC 1922618 Query 20606 CCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGC 20665 | ||||||||| |||| || || ||||||||||||||| || | || ||| Sbjct 1922619 TTCTCGAGGAACTCCTTGGACCCGTTCCCGTCCCATATCTTGACGCCCTTCGCCGAGAGC 1922678 Query 20666 TCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGCCAA 20725 | | | | ||| || | || || ||||| || ||||| | || | ||| || Sbjct 1922679 TGCTTCGCGTCTGTGCATCCGCGCACGAACCATAGGAGCTCCTCGACGATGCCGCGGAGG 1922738 Query 20726 AACACCCGCTTTGTGGTTAGTA-AGGGAAAGT 20756 ||| ||||| ||||| || | ||||| ||| Sbjct 1922739 AACGTACGCTTCGTGGTGAGCAGAGGGAGAGT 1922770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372038631920