Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq51 118 2e-21 >seq51 Length=3165537 Score = 118 bits (130), Expect = 2e-21 Identities = 131/175 (75%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 243551 TTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAG 243610 |||||||| ||| || ||||||||||| | |||||| | ||||||||||| ||||| | Sbjct 1579379 TTCCATGCGCGCTCATCGGCATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTCG 1579320 Query 243611 CCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTG 243670 ||||||| | || | || || ||| | ||||| ||| | || ||||||||| | Sbjct 1579319 CCGACCGTCTACTCGTTGCCCTCGGTGACGAGAAGTACTACGGCGTCACGAACCCCTTCG 1579260 Query 243671 CCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 ||| ||||| | || ||||| || || || || ||||||||||| ||||| || Sbjct 1579259 ACTTCATGGACATGATCTCGCTCCAGGGCAAGACGAACTTCTTCGAGAAGCGCGT 1579205 Score = 104 bits (114), Expect = 5e-17 Identities = 122/165 (74%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 ||| || ||||||||| | | | ||| | || |||||||| ||||| |||||||| | Sbjct 1582093 GCTCATAGGCATGAACGCCCAGTTGATGTGTCAATACATCGAGTTCGTGGCCGACCGACT 1582152 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | |||||||||| |||| || |||||| | | |||||| || | ||| ||||| Sbjct 1582153 GCTGGTCGCGCTTGGAAATGACAAGCACTACAACGCGACGAACCCGTTCGACTTCATGGA 1582212 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | || ||||| ||||| || || ||||||||||| ||||| || Sbjct 1582213 CATGATATCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGT 1582257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878049970300