Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq51 138 1e-27 seq117 84.2 3e-11 >seq51 Length=3165537 Score = 138 bits (152), Expect = 1e-27 Identities = 347/520 (67%), Gaps = 8/520 (2%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | |||||||||||| |||||||| || || |||||| || || Sbjct 1579536 GCAAAGTCCGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACC- 1579594 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| || |||||||||| |||||| || | || || |||||||||||||| Sbjct 1579595 GGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGATA 1579654 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAAC 126226 ||||| || || || || | ||||||||| ||||||| | ||| | | | Sbjct 1579655 CCCTCGACGGCGGCAAAGGCGACGAGACGCTCCGCAAAGGCAACCTCCTTGTCGCTGATC 1579714 Query 126227 CACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAG 126286 || | ||||| | ||||| |||| ||| || |||| || | || || || ||| Sbjct 1579715 CAACGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCAATGGCATCGAAG 1579774 Query 126287 AGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 || | | | | |||| || || |||||||| | || ||||| || || || || Sbjct 1579775 AGGTATTCGCGCTGCTGA-GGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTC 1579833 Query 126346 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404 | ||| | | | ||| ||| || || ||||||| |||| || || || Sbjct 1579834 GGAGTGAATGTTCTCCATCATGATTTGGAAAC-CGTAGAAGCAGCGTGCCTCCGCGGCCT 1579892 Query 126405 GTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 126464 | ||||| | || ||| | || ||||| || || ||||||||| |||| | Sbjct 1579893 GGACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGCAGCGA 1579952 Query 126465 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 126521 | || || |||| | ||||| | | |||| ||||| | || | ||||||| Sbjct 1579953 AGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTCGTTGAGGCGGTTGTTCCAGT 1580012 Query 126522 CGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||| || ||||| || ||||| | ||||||||| ||||| Sbjct 1580013 CGTGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCA 1580052 Score = 105 bits (116), Expect = 8e-18 Identities = 229/340 (67%), Gaps = 16/340 (5%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 |||||||| ||| |||||| || ||||| || || || ||||| || || |||||| Sbjct 1581900 CCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAGGCCGGGCATTAGCCCGCGCTTC 1581841 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | |||||||| ||||||||||| ||||| || ||||| Sbjct 1581840 TTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAG 1581781 Query 126185 GCAAAGAGACGCTCAGCAAA---GGAGCGCGACTTTGTGTCA-AACCACTTCATCGCCCA 126240 |||| ||| |||||||| || |||||| | || | | ||| | ||||| Sbjct 1581780 GCAACGAGCCGCTCAGCGAACACTGAGCGC----TCGTCAGATATCCAGCGGAGTGCCCA 1581725 Query 126241 CTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTC 126300 | ||||| |||| ||| || |||| ||||| ||| || || ||||| | || Sbjct 1581724 GTCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTCGAAGAGGAAGGTACGCTC 1581665 Query 126301 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATT-- 126358 | ||||| |||||||| | || ||||| ||||| || || ||| || || Sbjct 1581664 GGCGGGATCCTTGATGTAGGTGTCAATGAGGAGGGAATAGGTCTCAGAGTGCACGTTTTC 1581605 Query 126359 --TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 126396 ||||||| |||| | ||||||| |||| || || Sbjct 1581604 GATCATTAT----CTGAAAGCCGTAGAAGCAGCGGGCCTC 1581569 >seq117 Length=1514007 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| ||||| ||||| | ||| ||||| || || ||| || || || ||||||||||| Sbjct 682230 GTGTAGACCTTCGTCCCTGGAAATGAGCTCGTTGGAGTGACAGAGGCCAGGCATGAGACC 682171 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 || |||||| |||||| || ||| ||| || ||||| |||||||| || || Sbjct 682170 GCGGCTCTTCAGCCAGAATATGGCAGCAAAGGAGGATGAGAAAAAGATTCCTTCAACGGC 682111 Query 126178 CGCGAACGCAAAGA 126191 |||||||||| || Sbjct 682110 GGCGAACGCAATGA 682097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352569565040