Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 111 2e-19 seq117 86.0 6e-12 >seq1 Length=3841264 Score = 111 bits (122), Expect = 2e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 || |||||| ||||||||||| ||||||||| ||||||| |||||||| |||||| Sbjct 3254414 TCTTACATCGCTGGTACCAATGGATACTCCAACGGTATCGTCCCCATGCTCCGCGTCTTC 3254355 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 || | || |||||||| ||||| ||||| | | | ||| | ||||| || Sbjct 3254354 GACTCTACCGCCCGCTACGTCGACCAAGGTGGCAACAAGCGCCCTGGTGCATTCGCCATC 3254295 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || | ||||| ||||| ||||||| | ||| | |||||||| |||||||| ||| Sbjct 3254294 TACTTGGAGCCGTGGCATCCGGACGTCTTCGAGTTCTTGGACCTGCGCAAGAACCATGGC 3254235 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 || || || | || | ||| | ||||| || || ||| | || ||||| || Sbjct 3254234 AAGGAGGAGGTTCGCGCTCGTGACTTGTTCTATGCCCTTTGGATTCCCGACCTCTT 3254179 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 95292 CAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGAC 95351 |||||| || |||||||||||| || || || ||| |||||||| |||||||||| Sbjct 3253058 CAACGGATCGGTCCAGAACATCGACATCATTCCAGACGACGTCAAGGCGATCTACAAGAC 3252999 Query 95352 CGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCAT 95411 ||| ||||||||| ||||| | | |||| | ||| || | ||| || | ||||| Sbjct 3252998 CGTCTGGGAGATCTCGCAGAAGAAGGTCATCGATCTCGCTGCGGACCGTGGCGCGTTCAT 3252939 Query 95412 CTGCCAG 95418 ||||||| Sbjct 3252938 CTGCCAG 3252932 >seq117 Length=1514007 Score = 86.0 bits (94), Expect = 6e-12 Identities = 96/126 (76%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 95296 GGCTCCGTCCAGAACATC-CCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGT 95354 ||||| |||||||| ||| |||| | ||||| ||| | ||||| |||||||||||| Sbjct 669827 GGCTCTGTCCAGAATATCTCCGCTG-TCCCGGATGACCTGAAGGCTATCTACAAGACCGC 669885 Query 95355 GTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTG 95414 |||||||||||| ||| | | | |||| || |||| ||||| || |||||||| Sbjct 669886 GTGGGAGATCCCCCAGAAGGCCTTGGTGGACCTTGCCGCCGATCGCGGACCATTCATCTG 669945 Query 95415 CCAGAG 95420 |||||| Sbjct 669946 CCAGAG 669951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722346602480