Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 125 7e-24 seq51 107 2e-18 seq62 95.1 1e-14 >seq2 Length=1429897 Score = 125 bits (138), Expect = 7e-24 Identities = 150/200 (75%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| || || || ||||| ||||| ||||| | | Sbjct 256971 GACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTGCTTACCCGCA 256912 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| | ||||| |||||||| || ||||| || || || ||| | |||| || | Sbjct 256911 AAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCC-TGAATCTTTGCCTTGAC 256853 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 |||| | | |||||| | ||||||||||||| || | ||| || || |||||||| | Sbjct 256852 GTTGT-CGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTCAGAGTCT 256794 Query 138599 TTACAAAAATCTGCATGGCT 138618 | ||||| ||||||||| || Sbjct 256793 TGACAAAGATCTGCATGCCT 256774 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| ||||||||||||||| | ||| || ||||||||| || || || | Sbjct 256692 TTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAG 256633 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| || ||||| ||||| || || || || || ||||| ||| || ||| | Sbjct 256632 CGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGA 256573 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | ||| || | ||||| ||||||| || | ||| || ||||||||||| | Sbjct 256572 CGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAGAGTCT 256513 Query 138599 TTACAAAAATCTGCATGGCT 138618 | ||||| ||||||||| || Sbjct 256512 TGACAAAGATCTGCATGCCT 256493 >seq51 Length=3165537 Score = 107 bits (118), Expect = 2e-18 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 52650 GCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTT 52709 || || ||||| ||| | ||||||||||| |||| ||||| | ||||||||||| Sbjct 1582079 GCTCTACCGGTATCGCTCATAGGCATGAACGCCCAGTTGATGTGTCAATACATCGAGTTC 1582138 Query 52710 GTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCG 52769 ||||| || || ||| |||| ||| || | ||| ||| |||||| || ||| Sbjct 1582139 GTGGCCGACCGACTGCTGGTCGCGCTTGGAAATGACAAGCACTACAACGCGACGAACCCG 1582198 Query 52770 TTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTC 52829 || || || ||| ||| || ||||| | |||||||| ||||| ||||||||||| || Sbjct 1582199 TTCGACTTCATGGACATGATATCGCTGCAAGGCAAGACGAACTTCTTCGAGAAGCGCGTG 1582258 Query 52830 GGCGAGTAT 52838 ||||||| Sbjct 1582259 TCCGAGTAT 1582267 Score = 86.0 bits (94), Expect = 6e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 52671 GGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTG 52730 ||||||||| | || ||||||| ||||||||||||| || || || ||||| | || Sbjct 1579362 GGCATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGTCTACTCGTT 1579303 Query 52731 CAGCTCGGGCAGCCAAAGTACTTCAACGCTCGC-AATCCGTTTGAGTTTATGAACAACAT 52789 ||||| | ||||||| | || || | || || || || || ||| ||| || Sbjct 1579302 GCCCTCGGTGACGAGAAGTACTACGGCG-TCACGAACCCCTTCGACTTCATGGACATGAT 1579244 Query 52790 TTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 ||||| |||||||||| ||||| ||||||||||| || Sbjct 1579243 CTCGCTCCAGGGCAAGACGAACTTCTTCGAGAAGCGCGT 1579205 >seq62 Length=3011317 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| |||||||||||||| || || || ||||| ||||| ||||||| Sbjct 735336 TTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGTTGCTTACCGG 735395 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| ||||| || ||||| || || || || || ||||| ||| | || | || Sbjct 735396 CGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTC-TTGAATCTTCGCCTTG 735454 Query 138539 A--TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 | ||| || | ||| || | |||||| ||||||| || | || || || |||| || Sbjct 735455 ACGTTG-TCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTCAACGT 735513 Query 138597 TTTTACAAAAATCTGCAT 138614 || || || |||||||| Sbjct 735514 CTTGACGAAGATCTGCAT 735531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261543947360