Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2 136 4e-27 seq62 104 2e-17 seq51 100 3e-16 >seq2 Length=1429897 Score = 136 bits (150), Expect = 4e-27 Identities = 155/203 (76%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| ||| || |||||| ||| || || || || || Sbjct 256974 GTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTGCTTACCC 256915 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 || ||||||| |||||||| || || || || |||||||| ||| ||| | | ||| || Sbjct 256914 GCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCC-TGAATCTTTGCCTT 256856 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || ||||| ||| |||||||| | ||| || |||| || | ||| ||||||||||||| Sbjct 256855 GACGTTGT-CGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTCAGAG 256797 Query 127095 TTTTTACAAAAATCTGCATGGCT 127117 | || ||||| ||||||||| || Sbjct 256796 TCTTGACAAAGATCTGCATGCCT 256774 Score = 127 bits (140), Expect = 2e-24 Identities = 151/202 (75%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || ||||| ||||| ||| | |||||| || || ||||| || ||| Sbjct 256693 GTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCA 256634 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| |||| | |||||||| || || || ||||||||||||||| ||| || ||| Sbjct 256633 GCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTG 256574 Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | |||| || | ||| |||| |||||| |||| ||| | ||| ||||| |||||||| Sbjct 256573 ACGTTG-TCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAGAGT 256515 Query 127096 TTTTACAAAAATCTGCATGGCT 127117 || ||||| ||||||||| || Sbjct 256514 CTTGACAAAGATCTGCATGCCT 256493 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| || || || || ||||| | |||||| ||| || ||||| || || ||| | Sbjct 257249 CTCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAA 257190 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 ||| | ||||||||||| || || || |||||||||||| ||| ||| ||| | | Sbjct 257189 GATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 257130 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 |||| ||||| | |||||| || | || | || || || || || || || || Sbjct 257129 ATCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTCTTCCCCGTGAGGGTCTTGAC 257070 Query 127102 AAAAATCTGCAT 127113 ||||||||||| Sbjct 257069 GAAAATCTGCAT 257058 >seq62 Length=3011317 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 126916 CGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCC 126975 ||| ||||| || ||||| ||||| || || |||||| ||| || || || || || Sbjct 735334 CGTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGTTGCTTACC 735393 Query 126976 AGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTT 127035 ||| |||| | || ||||| || || || |||||||||||||| || ||| ||| Sbjct 735394 GGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATCTTCGCCTT 735453 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || |||| |||| ||| |||| |||||| |||| ||| | || ||||| |||| | Sbjct 735454 GACGTTG-TCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGTCAACG 735512 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || |||||||| Sbjct 735513 TCTTGACGAAGATCTGCAT 735531 >seq51 Length=3165537 Score = 100 bits (110), Expect = 3e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 47382 TTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTAC 47441 ||||| |||||||| || | ||| | | || |||||||| || ||||| | | ||| Sbjct 1582070 TTCGCAGAGGCTCTACCGGTATCGCTCATAGGCATGAACGCCCAGTTGATGTGTCAATAC 1582129 Query 47442 ATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACC 47501 ||||| || || |||||||| ||||| || ||| || |||| ||| || | Sbjct 1582130 ATCGAGTTCGTGGCCGACCGACTGCTGGTCGCGCTTGGAAATGACAAGCACTACAACGCG 1582189 Query 47502 GAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAG 47561 ||| || ||||| || ||| ||| || ||||| | |||||||| ||||| |||||| Sbjct 1582190 ACGAACCCGTTCGACTTCATGGACATGATATCGCTGCAAGGCAAGACGAACTTCTTCGAG 1582249 Query 47562 AAGCGCGT 47569 |||||||| Sbjct 1582250 AAGCGCGT 1582257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475499979761120