Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 122 8e-23 seq62 96.9 3e-15 >seq2 Length=1429897 Score = 122 bits (134), Expect = 8e-23 Identities = 155/209 (74%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCA 45192 ||||| || || || ||||| || || || || ||| ||| | | | ||| |||| Sbjct 256983 AGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCG--GACAGCGTGCGGCCATCCTCCA 256926 Query 45193 ATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAA 45252 ||| || || || | ||||| || ||||||||||| ||||| || || ||||| |||| Sbjct 256925 GTTGCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAA 256866 Query 45253 TTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 | ||| |||| || | || | |||||| |||||||| || |||||||| | ||| ||| Sbjct 256865 TCTTTGCCTTGA-CGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTG 256807 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| || ||||| || ||||| Sbjct 256806 CCGGTCAGAGTCTTGACAAAGATCTGCAT 256778 >seq62 Length=3011317 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 45135 AGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAAT 45194 || || |||||||| ||||| || || || || || | ||| | ||| |||| | Sbjct 735326 AGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGT 735385 Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || || || ||| | || | ||||||||||| ||||||||||| || || |||||||| Sbjct 735386 TGCTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATC 735445 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || |||| || | || | ||| || || |||||||| ||||| || | || ||||| Sbjct 735446 TTCGCCTTGA-CGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCC 735504 Query 45314 GGTTAGAGTTTTTACAAAAATTTGCATCGCGCGAC 45348 || | || || || || || ||||| ||| || Sbjct 735505 CGTCAACGTCTTGACGAAGATCTGCATTCCGCCAC 735539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002420294480