Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq51 141 1e-28 seq117 84.2 3e-11 >seq51 Length=3165537 Score = 141 bits (156), Expect = 1e-28 Identities = 353/526 (67%), Gaps = 20/526 (4%) Strand=Plus/Plus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||||||| |||||||| || || |||||| ||||| Sbjct 1579536 GCAAAGTCCGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACC- 1579594 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| || |||||||||| |||||| || | || ||||| ||||||||||| Sbjct 1579595 GGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGATA 1579654 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG-AGCGGGACTTTGT-----A 127693 ||||| || || || || | |||||||| ||||||| | | | |||| | Sbjct 1579655 CCCTCGACGGCGGCAAAGGCGACGAGACGCTCCGCAAAGGCAAC--CTCCTTGTCGCTGA 1579712 Query 127694 TCAAACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCT 127753 || ||| | | ||||| | ||||| |||| ||| || |||| || | || || Sbjct 1579713 TCCAACGA----AGAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCAATGGCA 1579768 Query 127754 TCAAAGAGTTCCT-TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATA 127812 || ||||| | | | | |||| || || |||||||| | || ||||| || || Sbjct 1579769 TCGAAGAGGTATTCGCGCTGCTGA-GGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTA 1579827 Query 127813 TGTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGC 127871 || ||| ||| | | | ||| ||| || || ||||||| |||| || || Sbjct 1579828 GGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAAC-CGTAGAAGCAGCGTGCCTCCG 1579886 Query 127872 TTATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACC 127931 ||| ||||| | || ||| | || ||||| || || ||||||||| Sbjct 1579887 CGGCCTGGACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCATCGGACG 1579946 Query 127932 CAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCT 127988 |||| || || || |||| | ||||| | | |||| ||||| | || | | Sbjct 1579947 CAGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTCGTTGAGGCGGTTGT 1580006 Query 127989 TCCAGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||||||| ||| ||||| || ||||| | ||||||||| ||||| Sbjct 1580007 TCCAGTCGTGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCA 1580052 Score = 102 bits (112), Expect = 1e-16 Identities = 227/339 (67%), Gaps = 14/339 (4%) Strand=Plus/Minus Query 127538 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 127597 |||||||| ||| |||||| || ||||| || || || ||||| || || |||||| Sbjct 1581900 CCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAGGCCGGGCATTAGCCCGCGCTTC 1581841 Query 127598 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 127657 || | |||||| || | ||||| |||||||||||||| ||||| || ||||| Sbjct 1581840 TTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAG 1581781 Query 127658 GCAAATAGACGCTCGGCAAA---GGAGCGGGACTTTGTATCAAACCACTTCATCGCCCAC 127714 |||| || ||||| || || ||||| || | | ||| | ||||| Sbjct 1581780 GCAACGAGCCGCTCAGCGAACACTGAGCG---CTCGTCAGATATCCAGCGGAGTGCCCAG 1581724 Query 127715 TGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 127774 | |||||| |||| ||| ||||||| ||||| ||| || || ||||| | || Sbjct 1581723 TCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTCGAAGAGGAAGGTACGCTCG 1581664 Query 127775 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATT--- 127831 | ||||| |||||||| | || ||||| ||||| || || ||| || || Sbjct 1581663 GCGGGATCCTTGATGTAGGTGTCAATGAGGAGGGAATAGGTCTCAGAGTGCACGTTTTCG 1581604 Query 127832 -TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTC 127869 ||||||| |||| | ||||||| |||| || || Sbjct 1581603 ATCATTAT----CTGAAAGCCGTAGAAGCAGCGGGCCTC 1581569 >seq117 Length=1514007 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| ||||| ||||| | ||| ||||| || || ||| || || || ||||||||||| Sbjct 682230 GTGTAGACCTTCGTCCCTGGAAATGAGCTCGTTGGAGTGACAGAGGCCAGGCATGAGACC 682171 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 || |||||| |||||| || ||| ||| ||| ||||| ||||| || || || Sbjct 682170 GCGGCTCTTCAGCCAGAATATGGCAGCAAAGGAGGATGAGAAAAAGATTCCTTCAACGGC 682111 Query 127651 CGCGAACGCAA 127661 |||||||||| Sbjct 682110 GGCGAACGCAA 682100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506141700080