Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq2 129 1e-24 seq62 125 2e-23 >seq2 Length=1429897 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||| |||| ||| || || | | || | ||||| Sbjct 257269 AGGACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCATCC 257210 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||||||||||||||| ||||| || || || ||| Sbjct 257209 TCGAGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCC 257150 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||||| | | || || |||| |||||| ||| Sbjct 257149 TGGATCTTCGCCTTCACGTTATCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTC 257090 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || ||||| || Sbjct 257089 TTCCCCGTGAGGGTCTTGACGAAAATCTG 257061 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 || || || ||||||||||| || | ||||||||| | || || | ||||| ||||| Sbjct 256983 AGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGT 256924 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || || ||||| | |||||||||||||| ||| || || ||||||||| Sbjct 256923 TGCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATC 256864 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 ||| ||| ||| |||| |||||| | | || || || | ||||||||||| || Sbjct 256863 TTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCG 256804 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || ||||| || || Sbjct 256803 GTCAGAGTCTTGACAAAGATCTG 256781 Score = 109 bits (120), Expect = 1e-18 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 |||||||||| || |||||||| || | ||||||||| | | ||| | || || || | Sbjct 256704 CAAGGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGA 256645 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || ||||||||||| ||||||||||| || || || || ||||| | Sbjct 256644 GCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGA 256585 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| || ||| || | ||| || | | || || || | ||||||||||| | Sbjct 256584 TCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGC 256525 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || ||||| || ||||| || || Sbjct 256524 CAGTCAGAGTCTTGACAAAGATCTG 256500 Score = 93.3 bits (102), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 ||||| || || |||||||| |||| ||||||||||| | ||| | || || || ||| Sbjct 256412 AGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCGAGC 256353 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 ||||| |||||||||||||| |||||||| || ||| Sbjct 256352 TGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGA 256317 >seq62 Length=3011317 Score = 125 bits (138), Expect = 2e-23 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 199438 CTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAA 199497 ||| || |||| |||||| || | | || | || || ||||||||||| || ||||| Sbjct 734776 CTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAA 734835 Query 199498 GATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGA 199557 |||||| ||||| ||||| || ||| || || ||||||||||| ||||||| Sbjct 734836 GATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTTCGCCTTCACGTT 734895 Query 199558 TTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCAC 199617 |||| ||||| | | ||| || ||||||||||||||||| |||||||| || ||||| Sbjct 734896 GTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCCGTGAGCGTCTTCAC 734955 Query 199618 AAAAATTTG 199626 || || || Sbjct 734956 GAATATCTG 734964 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 ||||| || || |||||||| || | ||||||||| | ||| || | ||||| ||||| Sbjct 735326 AGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGT 735385 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| ||||||||||| ||||| |||||||| || ||| || || || |||||| Sbjct 735386 TGCTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATC 735445 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || ||| ||| |||| ||| || | | || || || | ||||| ||||| ||| Sbjct 735446 TTCGCCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCC 735505 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || | || || || || || || Sbjct 735506 GTCAACGTCTTGACGAAGATCTG 735528 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| |||||||||||||||||||| || | ||||||||| | | || | || || Sbjct 735548 AGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTACGACCGTCC 735607 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| || |||||||| | |||||||| ||||| Sbjct 735608 TCGAGCTGCTTGCCCGCGAAGATCAAGCGCTGCTGATCCGG 735648 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 || ||||| || || ||||||||||||| ||| ||||| | | || | ||||||||| Sbjct 734987 ACCAGGTGAAGCGTGGACTCCTTTTGGATGTTATAGTCCGAAAGGGTACGTCCATCTTCG 735046 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 |||||||| |||||||| || | |||||| || || ||| Sbjct 735047 AGCTGCTTCCCGGCGAAAATCAAACGCTGTTGATCGGGA 735085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178919515519246