Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq51 311 9e-80 seq62 127 2e-24 seq2 118 1e-21 seq13 91.5 1e-13 seq35 86.0 6e-12 seq58 84.2 2e-11 >seq51 Length=3165537 Score = 311 bits (344), Expect = 9e-80 Identities = 426/591 (72%), Gaps = 8/591 (1%) Strand=Plus/Plus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||| | |||||| |||||||| |||| |||||||| | || ||||| |||||| Sbjct 1579522 TGAAGAGCAAGCACGCAAAGTCCGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGG 1579581 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| || | |||| ||||||||| || || || ||||| || |||| |||||| || Sbjct 1579582 AGAAGGTGAGACCGG-CATGAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGC 1579640 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 |||| ||||||| ||||||||||| || || || || || ||||| | || | | | Sbjct 1579641 CCGAGAAGAAGATACCCTCGACGGCGGCAAAGGCGACGAGACGCTCCGCAAAGGCAACCT 1579700 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | ||| | |||||| || || ||||| |||||||| | |||| ||| || ||||| | Sbjct 1579701 CCTTGTCGCTGATCCAACGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGT 1579760 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGAG 133181 | ||||| | || | | | | | || | |||| | | ||||||||||||||| Sbjct 1579761 CAATGGCATCGAAGAG--GTATTCGCGCTGCTGAGGGTCCTTGATGTAGGTGTCGATGAG 1579818 Query 133182 GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCG 133241 | || || | || ||||| | ||||||||| |||||| || ||||| ||||| || Sbjct 1579819 GAGGGAGTAGGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCG 1579878 Query 133242 CGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCC 133301 ||||| | |||| || || | | |||||||||||| || || ||||||||||| || Sbjct 1579879 TGCCTCCGCGGCCTGGACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACC 1579938 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 ||| || ||||| ||||| || ||||| |||||| || ||||| | |||||| | Sbjct 1579939 ATCGGACGCAGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTCGTTGAG 1579998 Query 133362 GCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGA 133418 ||| | ||||||| | |||||||||||| |||| |||||| | ||||| || || Sbjct 1579999 GCGGTTGTTCCAGTCGTGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCAGAAGGA 1580058 Query 133419 CGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAA 133469 ||||| || ||||||||||| ||| || || ||||| ||||| || Sbjct 1580059 GGCCTCAGCCTTTTTGTACATCTGCCAGATTTCGTGGTATTGGATGGGGAA 1580109 Score = 223 bits (246), Expect = 3e-53 Identities = 377/540 (70%), Gaps = 17/540 (3%) Strand=Plus/Minus Query 132910 TGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCG 132969 |||| |||||||| | | ||||| ||||| || || | ||||||||| || ||| Sbjct 1581906 TGCATCCCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAGGCCGGGCATTAGCCCG 1581847 Query 132970 CGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCC 133029 || || |||| ||| || |||| |||||| || || ||||||| ||||||||||| Sbjct 1581846 CGCTTCTTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAAGATACCCTCGACGGCG 1581787 Query 133030 GCGAAAGCCACCAGGCGCTCGCCGAACG-TG---GCTTCTTTGCTGGCGATCCAGCGCAG 133085 ||||| || || || ||||| ||||| || ||| | | | |||||||| || Sbjct 1581786 GCGAAGGCAACGAGCCGCTCAGCGAACACTGAGCGCTCGTCAGAT----ATCCAGCGGAG 1581731 Query 133086 CGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAG 133145 ||||| || ||||| | |||| ||| || || || |||||||||| || | | || Sbjct 1581730 TGCCCAGTCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTCGAAGAG--GAAG 1581673 Query 133146 TTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTG 133202 | | || | | || | | | ||||||||| |||||| ||||| | || ||||| Sbjct 1581672 GTACGCT-CGGCGGGATCCTTGATGTAGGTGTCAATGAGGAGGGAATAGGTCTCAGAGTG 1581614 Query 133203 TACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTC 133262 ||||| || || || ||||||||||| ||||| || ||||| | |||| ||||| Sbjct 1581613 CACGTTTTCGATCATTATCTGAAAGCCGTAGAAGCAGCGGGCCTCCGCGGCCTGGACTTC 1581554 Query 133263 TTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGC 133322 | | ||| |||||||| || || ||||| ||||| ||||| ||||||||| ||||| Sbjct 1581553 ATTCGAGAACCGCTCGACAAGGTTCTCGTTCACGATACCGTCTGAGGCGGCGAAGAAGGC 1581494 Query 133323 CAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGT 133379 || || | | |||||| |||||||| | | | | | | |||||| | Sbjct 1581493 GAGGACATAGGACAGGAAATGCCGCTCGTTTGGGGTGAGTCTCCCGTTCCAGTCCCAGAG 1581434 Query 133380 GTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||| | || ||||| | |||||| || ||||||||||| || | |||| |||||||| Sbjct 1581433 GTCGTGCGAGAGGTCAATCTCCTCCACTGTCCAAAACGAGGCTTGGGCTCGCTTGTACAT 1581374 >seq62 Length=3011317 Score = 127 bits (140), Expect = 2e-24 Identities = 155/206 (75%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| |||||||| || |||||||||||||| || ||||| | || ||||| | | Sbjct 734967 ATGCAGATATTCGTGAAGACGCTCACGGGCAAGACGATCACGTTGGAGGTCGAATCTTCG 734908 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | || || ||||| ||||| | ||||| Sbjct 734907 GACACGATCGACAACG-TGAAGGCGAAGATTCAGGATAAGGAGGGTATTCCGCCAGACCA 734849 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||||||||| |||||||| |||| |||||| ||| || ||||| Sbjct 734848 ACAGCGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGGCGCACGCTCTCGGATTACAA 734789 Query 38423 CATCCA-AAAGGAAGCGACGCTGCAT 38447 |||||| |||| ||| ||||| ||| Sbjct 734788 CATCCAGAAAGAGAGC-ACGCTTCAT 734764 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || ||| | |||||||| || |||||| |||| |||||| | | Sbjct 735532 AATGCAGATCTTCGTCAAGACGTTGACGGGCAAGACTATCACCCTCGAGGTCGAGTCGTC 735473 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 || | | | | |||| | || | || || | ||||| ||||| ||||| | |||| Sbjct 735472 GGATACCATCGACAACG-TCAAGGCGAAGATTCAAGACAAGGAGGGCATTCCGCCTGACC 735414 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || || || | ||| || || || ||||| || | |||||| | ||||||| Sbjct 735413 AGCAACGTCTTATCTTCGCCGGTAAGCAACTGGAGGATGGTCGCACCTTGTCGGACTACA 735354 Query 38422 ACATCCAAAAGGAAGCGACGCTGCA 38446 |||| || ||||| | ||||| || Sbjct 735353 ACATTCAGAAGGAGTCAACGCTTCA 735329 >seq2 Length=1429897 Score = 118 bits (130), Expect = 1e-21 Identities = 145/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| || |||||| |||| |||||| || | Sbjct 256497 ATGCAGATCTTTGTCAAGACTCTGACTGGCAAGACGATCACCCTCGAGGTCGAGTCCTCG 256556 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 || | | | | |||| | |||| || |||| ||||| ||||| || |||||| |||| Sbjct 256557 GATACCATTGACAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCTGACC 256614 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| ||||| || |||||||| Sbjct 256615 AGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCCGACTACA 256674 Query 38422 ACATCCAAAAGGA 38434 |||| || ||||| Sbjct 256675 ACATTCAGAAGGA 256687 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| || ||||| |||| || ||| | | Sbjct 256778 ATGCAGATCTTTGTCAAGACTCTGACCGGCAAGACGATCACTCTCGAGGTGGAGTCTTCG 256837 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||| || | || || ||||| |||||| | ||||| Sbjct 256838 GACACCATCGACAACG-TCAAGGCAAAGATTCAGGATAAGGAGGGTATTCCCCCGGACCA 256896 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||||| || || ||||| || | ||||| || ||||||||| Sbjct 256897 GCAGCGGTTGATCTTTGCGGGTAAGCAACTGGAGGATGGCCGCACGCTGTCCGACTACAA 256956 Query 38423 CATCCAAAAGGAAGCGACGCTGCAT 38447 ||| || ||||| |||| || ||| Sbjct 256957 CATTCAGAAGGAGTCGACCCTTCAT 256981 >seq13 Length=1377620 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 || ||| ||||||| ||||| || |||| ||| ||||| ||||| || |||| || || Sbjct 90886 ATCCCCCCCGACCAGCAGCGCCTGATTTTCGCCGGCAAGCAGCTTGAGGACGGCCGTACG 90827 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| ||||||||||||||| ||||| | || || || ||||||| || Sbjct 90826 CTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCG 90777 >seq35 Length=1232546 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 || ||| |||| || ||||| || || | ||||||||| ||||| || |||| ||||| Sbjct 1141312 ATCCCCCCCGATCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACG 1141371 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| ||||||||||||||| ||||| | || || || | ||||| || Sbjct 1141372 CTCAGCGACTACAACATCCAGAAGGAGTCTACCCTTCACCTTGTGCTCCG 1141421 >seq58 Length=595509 Score = 84.2 bits (92), Expect = 2e-11 Identities = 172/251 (69%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTG- 132942 || ||| ||| || |||||| ||||| |||||||| | ||| ||||| || || Sbjct 329038 TGTACAGCAAACACGCAAAGGACGTATGCATCCCCTCGTCTCGGGATATGAGCTCATTAG 329097 Query 132943 -CTGAAAGTCAAGC-CGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAAC 133000 ||| || |||| | ||||| | |||||| | | ||| || ||||| ||||| Sbjct 329098 ACTGC--GT-AAGCGCAGGCATCAAGCCGCGGCTGCGAATCCAGAAGATGGCAGCGAACG 329154 Query 133001 TGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGG 133060 || ||||| |||||||| || |||||| || |||| |||| ||||| | | Sbjct 329155 ACGATGAGAAGAACACGCCCTCCACAATCGCGAATGCAACCAAGCGCGTTCCGAAGTTAG 329214 Query 133061 CTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCG 133120 | || ||| |||||||||| || |||||||||||| | || || |||||| | Sbjct 329215 CGTCCGCGCTCTCGATCCAGCGGAGACACCATTCGGCCTTGGCCTTTACCGCCGGCATGG 329274 Query 133121 TTTCGATGGCG 133131 |||| || ||| Sbjct 329275 TTTCAATTGCG 329285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171937201920