Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq13 105 8e-18 seq73 89.7 6e-13 seq51 87.8 2e-12 seq63 82.4 9e-11 seq54 82.4 9e-11 seq53 82.4 9e-11 seq47 82.4 9e-11 seq1 82.4 9e-11 >seq13 Length=1377620 Score = 105 bits (116), Expect = 8e-18 Identities = 241/355 (68%), Gaps = 12/355 (3%) Strand=Plus/Minus Query 11593 AAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG-----G 11647 ||||||||||| || ||| |||||||||| |||||| || ||||| |||||| | Sbjct 422081 AAACCGTCCATCTCGACGAGGAGCTGGTTGAGCGTCTGCTCGCGCTCGTCGTTGCCCCCG 422022 Query 11648 AGGGCATACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGA 11707 | | | | | |||| ||| ||| || | |||||| || ||||| ||||| | || Sbjct 422021 AAACCTTTGCCCTTGCC--ACGGGACTTGCCAATAGCGTCGATTTCATCAATGAAGATGA 421964 Query 11708 TACACGGTTGGTTGGCACGTGCCTGT-TCGAAAAGTTCACGTACACGCTTCGCTCCAACA 11766 | |||| ||| | | | || |||| || || || ||||| || || ||| Sbjct 421963 TCGACGGCGCGTT-CTTCTTCGCAGTGGCGAAGAGGTCGCGCACACGGGACGAACCGACA 421905 Query 11767 CCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGAAT-GAAGGGAACATTAGACTC 11825 || ||||| | ||| ||||| | | || | | || || | |||||| ||| | ||| Sbjct 421904 CCGACGAAGAGCTCGACGAA-CTCGGAGCCGGAGACGGAGTAGAAGGGGACACCGGCCTC 421846 Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGC 11885 ||| ||| | || ||||| || |||||||| || || || | || | ||| | ||| Sbjct 421845 ACCTGCGGTCGCCTTCGCGAGCAGGGTCTTACCAGTTCCCGG-GGGCCGGAGAGGATGGC 421787 Query 11886 GCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAG 11940 ||||| || ||||| |||||| || ||| || ||||| |||||||||| Sbjct 421786 ACCACGAGGAATCTTCGCACCAAGTCGCTCGTACCGAGTAGGCTCCTTGAGGAAG 421732 >seq73 Length=2658327 Score = 89.7 bits (98), Expect = 6e-13 Identities = 160/232 (69%), Gaps = 15/232 (6%) Strand=Plus/Plus Query 11553 GTTTGTAGCGGCAATGACTACAATGCCAGTCTCATTGTC---GAAACCGTCCATTTCTGT 11609 ||| || ||||||||||| | ||||| |||||| | |||||||||||| || Sbjct 1853110 GTTGGTCGCGGCAATGACGATGATGCC---CTCATTCTGCAGGAAACCGTCCATCTCCAC 1853166 Query 11610 GAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAACG 11669 ||||||||||||| ||||| | |||| | || || | ||| || || Sbjct 1853167 CAGAAGCTGGTTGAGAGTCTGCT-----TCAT----GTAGTGCTGATCACGGCTAGACCG 1853217 Query 11670 CTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGC 11729 ||| ||| | ||||| | ||| |||||||| | ||| ||| || || ||||| Sbjct 1853218 CTTGCCACCTATTGCGTCCAGCTCGTCGATGAAGATGATGGCCGGCTGCTTCTTGCGTGC 1853277 Query 11730 CTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCA 11781 |||| || || || ||||||||||| |||||||| |||||||||||| Sbjct 1853278 GGTGGCGAAGAGGTCGCGAACACGCTTCGCACCAACACCCACGAACATCTCA 1853329 >seq51 Length=3165537 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/224 (69%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 || || || |||||||||||||| || |||| || || |||||||| || | ||| Sbjct 1579554 CCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACC-GGCATGAGGCCACGCTTC 1579612 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| || || || |||||||| ||||| || ||| || Sbjct 1579613 TTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGATACCCTCGACGGCGGCAAAG 1579672 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTC---GAACCACTTGAGAGCCCAGTTG 119690 |||| |||||||| ||||| | |||||| || ||| |||||||||| | Sbjct 1579673 GCGACGAGACGCTCCGCAAAGGCAACCTCCTTGTCGCTGATCCAACGAAGAGCCCAGTCG 1579732 Query 119691 GCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 ||||| || ||||| |||| || | ||||| ||||| || Sbjct 1579733 GCCTTCTTCTTGATGCAAGGGATCGTGTCAATGGCATCGAAGAG 1579776 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 3004753 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 3004694 Query 136775 TTGG 136778 |||| Sbjct 3004693 TTGG 3004690 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 3047879 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 3047938 Query 136775 TTGG 136778 |||| Sbjct 3047939 TTGG 3047942 >seq63 Length=534024 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 486616 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 486675 Query 136775 TTGG 136778 |||| Sbjct 486676 TTGG 486679 >seq54 Length=666141 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 472454 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 472513 Query 136775 TTGG 136778 |||| Sbjct 472514 TTGG 472517 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 478214 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 478155 Query 136775 TTGG 136778 |||| Sbjct 478154 TTGG 478151 >seq53 Length=733768 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 22071 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 22130 Query 136775 TTGG 136778 |||| Sbjct 22131 TTGG 22134 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 40463 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 40522 Query 136775 TTGG 136778 |||| Sbjct 40523 TTGG 40526 >seq47 Length=875365 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 599381 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 599322 Query 136775 TTGG 136778 |||| Sbjct 599321 TTGG 599318 >seq1 Length=3841264 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 73479 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 73420 Query 136775 TTGG 136778 |||| Sbjct 73419 TTGG 73416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974984016400