Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq62 156 9e-33 seq2 145 2e-29 >seq62 Length=3011317 Score = 156 bits (172), Expect = 9e-33 Identities = 161/208 (77%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAG 194993 |||||||| || ||||| || ||||| ||||| || | |||| || | ||||| || || Sbjct 735326 AGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAAG-GTGCGACCATCCTCCAG 735384 Query 194994 CTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAAT 195053 |||||||| ||||||||||| ||||| ||||| || |||||||| || ||||||||||| Sbjct 735385 TTGCTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAAT 735444 Query 195054 TTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCC 195113 || ||||||||| || ||||| ||||| || || || ||||| | ||||| || Sbjct 735445 CTTCGCCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCC 735504 Query 195114 TGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || || ||||| | |||||| Sbjct 735505 CGTCAACGTCTTGACGAAGATCTGCATT 735532 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || ||||| ||| |||||| || || |||||||| | || || | ||| || || ||| Sbjct 734762 AGATGAAGCGTGCTCTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGC 734821 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || |||||||| || || ||||||||||| ||||| || || || || ||||| Sbjct 734822 TGCTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATC 734881 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || ||| ||||| || || ||||||||| ||| || || | || | |||||| || Sbjct 734882 TTCGCCTTCACGTTGTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCC 734941 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | ||||| Sbjct 734942 GTGAGCGTCTTCACGAATATCTGCAT 734967 Score = 87.8 bits (96), Expect = 4e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || |||||||| |||||||| ||||| || || || || | ||| || | ||||| Sbjct 734983 CAACACCAGGTGAAGCGTGGACTCCTTTTGGATGTTATAGTCCGAAAGGGTACGTCCATC 735042 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||||||| || ||||| || | || ||||| || ||||| || Sbjct 735043 TTCGAGCTGCTTCCCGGCGAAAATCAAACGCTGTTGATCGGGAGGGAT 735090 >seq2 Length=1429897 Score = 145 bits (160), Expect = 2e-29 Identities = 157/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||| || || ||||| || ||||| ||||| |||| |||||| | || || |||| Sbjct 256704 CAAGGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGA 256645 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| || || || ||||| || || ||||| || ||||| || | Sbjct 256644 GCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGA 256585 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || |||||||| |||||||| ||||| || || || ||||| | |||||| | Sbjct 256584 TCTTGGCTTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGC 256525 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||| ||| || || || | ||||| Sbjct 256524 CAGTCAGAGTCTTGACAAAGATCTGCAT 256497 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || ||||| || ||||| || ||||| ||||| |||| || || | ||||| || || Sbjct 256983 AGATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGT 256924 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 |||||||| || ||||| | || || ||||| || ||||| || || || || ||||| Sbjct 256923 TGCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATC 256864 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| ||||||||| || |||||||||||| ||||| || || || | |||||| || Sbjct 256863 TTTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCG 256804 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||| || || || | ||||| Sbjct 256803 GTCAGAGTCTTGACAAAGATCTGCAT 256778 Score = 100 bits (110), Expect = 6e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || ||| ||| || || || || ||||| | || || | ||||| ||| Sbjct 257266 ACAAGGTGGAGGGTGCTCTCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCATCCTCG 257207 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || || || || || || || ||||| || Sbjct 257206 AGCTGCTTGCCCGCGAAGATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGG 257147 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| || || ||||| || || || || || || | ||||| Sbjct 257146 ATCTTCGCCTTCACGTTATCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTCTTC 257087 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || ||||| | |||||| Sbjct 257086 CCCGTGAGGGTCTTGACGAAAATCTGCATT 257057 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 |||||||| |||||||| || || || ||||| || | |||||| | || || |||||| Sbjct 256412 AGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCGTCCTCGAGC 256353 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 ||||| || |||||||| || || || || || ||||| |||| Sbjct 256352 TGCTTGCCGGCGAAGATGAGGCGCTGCTGATCGGGAGGGATGC 256310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109479638297846