Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq51 266 6e-66 >seq51 Length=3165537 Score = 266 bits (294), Expect = 6e-66 Identities = 395/557 (71%), Gaps = 6/557 (1%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||||| ||| ||||||||| |||||| || ||||| || ||||||| ||||||||| Sbjct 1579525 AGAGCAAGCACGCAAAGTCCGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGA 1579584 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 || |||||| ||||||| || | || || |||||||| || | ||||| ||||| | Sbjct 1579585 AGGTGAGACC-GGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCCG 1579643 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| ||||| || || || || ||| ||| | ||| | || | | | | || Sbjct 1579644 AGAAGAAGATACCCTCGACGGCGGCAAAGGCGACGAGACGCTCCGCAAAGGCAACCTCCT 1579703 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 |||| |||||| ||| |||||||| ||||||||||||||||| || ||||| || | Sbjct 1579704 TGTCGCTGATCCAACGAAGAGCCCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCAA 1579763 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTG 48422 |||| |||||| | | || || | |||| | ||||| || || | Sbjct 1579764 TGGCATCGAAGAGGTATTCGCGCTGCTGAGGGTCCTTGATGTAGGTGTCGATGAGGAGGG 1579823 Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482 ||| |||| ||||| | ||||| || ||| ||||| ||||||||| | |||| Sbjct 1579824 AGTAGGTCTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGTGCCT 1579883 Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 | |||| || || ||||||| | ||| | || ||||| ||||| || ||||| | Sbjct 1579884 CCGCGGCCTGGACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCATCGG 1579943 Query 48543 AAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC-- 48600 | ||||| |||||||| ||||| || | ||| || ||||| | || | |||| || Sbjct 1579944 ACGCAGCGAAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTCGTTGAG-GCGG 1580002 Query 48601 --ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCG 48658 |||||| | || | ||| ||| ||| |||| || ||| | ||||||||||| || Sbjct 1580003 TTGTTCCAGTCGTGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCAGAAGGAGGCC 1580062 Query 48659 AGTGCTTTTTTGTACAT 48675 || ||||||||||| Sbjct 1580063 TCAGCCTTTTTGTACAT 1580079 Score = 248 bits (274), Expect = 2e-60 Identities = 397/568 (70%), Gaps = 9/568 (2%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | ||||| ||||| |||||| || ||||| |||||||||||| |||| || | Sbjct 1581929 AGAGAAGACAGGCGAAGTCAGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTCGAAA 1581870 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | ||| || ||||| | ||| | || |||| |||||| || | ||||| || |||| Sbjct 1581869 ATGTGAGGCCGGGCATTAGCCCGCGCTTCTTGATCCAGAAGATGGAGGCGAATGAACCAG 1581810 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCT 48302 |||||||||| ||||| || || ||||| || ||||| ||| |||| | | || Sbjct 1581809 AGAAGAAGATACCCTCGACGGCGGCGAAGGCAACGAGCCGCTCAGCGAACACTGAGCGCT 1581750 Query 48303 TGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTA 48362 ||| || |||||| || ||||||||||||||||||||||||||||| || ||||| | Sbjct 1581749 CGTCAGATATCCAGCGGAGTGCCCAGTCTGCCTTCTTCTTGATGCATGGGATGGTCTCGA 1581690 Query 48363 TGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCT 48419 |||| |||||| | | ||| | | ||| | ||||| | |||| || Sbjct 1581689 TGGCGTCGAAGAGGAAGGTACGCTCGGCGGGATCCTTGATGTAGGTGTCAATGAGGAG-- 1581632 Query 48420 TTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGG 48479 | || ||||||||||||| || || || ||||| || ||||||||| | || Sbjct 1581631 -GGAATAGGTCTCAGAGTGCACGTTTTCGATCATTATCTGAAAGCCGTAGAAGCAGCGGG 1581573 Query 48480 CCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCAT 48539 |||| |||| ||||| | ||||| | ||| | || ||||| || || || || | Sbjct 1581572 CCTCCGCGGCCTGGACTTCATTCGAGAACCGCTCGACAAGGTTCTCGTTCACGATACCGT 1581513 Query 48540 CTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-- 48597 |||| || || |||||||| ||||||| |||||||| |||||||| ||||||| Sbjct 1581512 CTGAGGCGGCGAAGAAGGCGAGGACATAGGACAGGAAATGCCGCTCGTTTGGGGTGAGTC 1581453 Query 48598 -AGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 | |||||| || | ||| | ||||| | || ||||| ||||| || || | Sbjct 1581452 TCCCGTTCCAGTCCCAGAGGTCGTGCGAGAGGTCAATCTCCTCCACTGTCCAAAACGAGG 1581393 Query 48657 CGAGTGCTTTTTTGTACATGCCCCATAT 48684 | | ||| |||||||| |||||| Sbjct 1581392 CTTGGGCTCGCTTGTACATCTGCCATAT 1581365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531193105920