Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq51 214 3e-50 >seq51 Length=3165537 Score = 214 bits (236), Expect = 3e-50 Identities = 395/572 (69%), Gaps = 17/572 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| ||||||||||| || ||| ||| ||||| | || |||||||| || Sbjct 1581365 ATATGGCAGATGTACAAGCGAGCCCAAGCCTCGTTTTGGACAGTGGAGGAGATTGACCTC 1581424 Query 25537 GCCAAGGACATGGACGGCTGGTACG-----CTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 | | ||| | | |||| ||| ||| ||||| ||||| |||||| || Sbjct 1581425 TCGCACGACCTCTGGGACTGGAACGGGAGACTCACCCCAAA--CGAGCGGCATTTCCTGT 1581482 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 || || | || ||||| || ||||| || ||||| ||||||||||| || |||| Sbjct 1581483 CCTATGTCCTCGCCTTCTTCGCCGCCTCAGACGGTATCGTGAACGAGAACCTTGTCGAGC 1581542 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 | ||| | | ||||| ||| || ||||||| || |||||||| || ||||| | Sbjct 1581543 GGTTCTCGAATGAAGTCCAGGCCGCGGAGGCCCGCTGCTTCTACGGCTTTCAGATAATGA 1581602 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACG 25768 ||||||| |||||||||||| ||| || || || || || ||||| | || Sbjct 1581603 TCGAAAACGTGCACTCTGAGACCTATTCC---CTCCTCATTGACACCTACATCAAGGATC 1581659 Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828 ||||||| | || || | ||||||||| ||| || ||||||||| ||||| Sbjct 1581660 CCGCCGAGCGTACCTTCCTCTTCGACGCCATCGAGACCATCCCATGCATCAAGAAGAAGG 1581719 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGT-TTGGC-GAGCGGCTGGT 25886 | ||||| | ||||| | | | | ||||||| || || || |||||||| || Sbjct 1581720 CAGACTGGGCACTCCGCTGGAT-ATCTGAC-GAGCGCTCAGTGTTCGCTGAGCGGCTCGT 1581777 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 ||||| || || || ||||| ||||| ||| ||||| || || ||||||||||| | Sbjct 1581778 TGCCTTCGCCGCCGTCGAGGGTATCTTCTTCTCTGGTTCATTCGCCTCCATCTTCTGGAT 1581837 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 |||| || ||| |||||||| || ||||| ||||||||||||||| | ||||| Sbjct 1581838 CAAGAAGCGCGGGCTAATGCCCGGCCTCACATTTTCGAACGAGCTCATCAGCCGCGACGA 1581897 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCT 26038 ||| | |||| || || ||||| || |||| Sbjct 1581898 GGGGATGCACACTGACTTCGCCTGTCTTCTCT 1581929 Score = 187 bits (206), Expect = 5e-42 Identities = 392/576 (68%), Gaps = 14/576 (2%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| |||||||||| |||||| | ||| |||||| || || ||||| ||| Sbjct 1580091 GAAATCTGGCAGATGTACAAAAAGGCTGAGGCCTCCTTCTGGACGGCGGAGGAGATGGAT 1580032 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 ||| |||||||| | ||| |||| || | ||| ||||| ||| | ||| Sbjct 1580031 CTGTCCAAGGACCTCCACGACTGGAACAACCGCCTCAACGACGATGAGCGTCACTTCATC 1579972 Query 25594 T---ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAG 25650 | |||| | || ||||| || || || |||||||| || |||||||| || |||| Sbjct 1579971 TCCCACGTCCTCGCCTTCTTCGCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTCGAG 1579912 Query 25651 AGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCC 25710 | ||| ||| || || ||| || |||||| || |||||||||||||| || Sbjct 1579911 CGTTTCTCCAACGAGGTCCAGGCCGCGGAGGCACGCTGCTTCTACGGTTTCCAAATCATG 1579852 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGAC 25767 || || || | ||||| ||| || || || || || || ||||| | ||| Sbjct 1579851 ATGGAGAACATTCACTCCGAGACCTACTCC---CTCCTCATCGACACCTACATCAAGGAC 1579795 Query 25768 GTCGCCG-AGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGA 25825 | | | || | || || || | |||||| || ||| || || ||||||||| || Sbjct 1579794 C-CTCAGCAGCGCGAATACCTCTTCGATGCCATTGA-CACGATCCCTTGCATCAAGAAGA 1579737 Query 25826 AGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGG 25885 |||| ||||| | ||||||| | | || | | | |||| ||||| || | Sbjct 1579736 AGGCCGACTGGGCTCTTCGTTGGATCAGCGACAAGGAGGTTGCCTTTGCGGAGCGTCTCG 1579677 Query 25886 TAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGC 25945 | |||||||| || || ||||| ||||| ||| || ||||| || |||||||||||| Sbjct 1579676 TCGCCTTTGCCGCCGTCGAGGGTATCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGGC 1579617 Query 25946 TCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005 | ||| || || |||| |||| || ||| ||||||||||||||| | |||| Sbjct 1579616 TGAAGAAGCGTGGCCTCATG-CCGGTCTCACCTTCTCCAACGAGCTCATCTCTCGTGACG 1579558 Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 ||||| | |||| || ||||| ||| |||||| || Sbjct 1579557 AGGGTATGCACACGGACTTTGCGTGCTTGCTCTTCA 1579522 Score = 91.5 bits (100), Expect = 3e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 26152 GGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGC 26211 ||||||||| | | ||| | |||||||| |||| |||||||||| |||||| | Sbjct 1582100 GGCATGAACGCCCAGTTGATGTGTCAATACATCGAGTTCGTGGCCGACCGACTGCTGGTC 1582159 Query 26212 CAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATA 26271 ||| ||| | || | ||||| || | |||||||||||||| ||||| | ||| Sbjct 1582160 GCGCTTGGAAATGACAAGCACTACAACGCGACGAACCCGTTCGACTTCATGGACATGATA 1582219 Query 26272 TCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||| || |||| ||||| |||||||| || ||| Sbjct 1582220 TCGCTGCAAGGCAAGACGAACTTCTTCGAGAAG 1582252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928843197742720