Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq51 181 1e-39 seq62 109 7e-18 seq1 109 7e-18 seq66 96.9 4e-14 seq73 89.7 6e-12 seq13 89.7 6e-12 >seq51 Length=3165537 Score = 181 bits (200), Expect = 1e-39 Identities = 217/289 (75%), Gaps = 12/289 (4%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| ||| ||| | |||||| |||| ||| |||| ||||||||| ||||| Sbjct 1579553 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCGG-CATGAGGCCACGCTT 1579611 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| ||||||| | ||| ||||||||| ||||| ||||||||||||||||| Sbjct 1579612 CTTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGATACCCTCGACGGCGGCAAA 1579671 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355 | ||| ||| ||||| ||||||| | | ||||||||| ||||||| | || Sbjct 1579672 GGCGACGAGACGCTCCGCAAAGG---CAA---CCTCCTTGTCGCTGATCCAACGAAGAGC 1579725 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC-CT 869414 |||||||||||| ||| | | | || | |||||| ||||| ||||||| || | Sbjct 1579726 CCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCAATGGCATCGAAGAGGTATTCGCG 1579785 Query 869415 TTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | | | |||||||||| ||||||||||| ||||| || |||||||| Sbjct 1579786 CTGCTG-AGGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTC 1579833 Score = 150 bits (166), Expect = 2e-30 Identities = 207/287 (72%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 ||||| |||||||| || ||| ||||| ||||| ||| | |||| || | ||| Sbjct 1579835 GAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCAGCGTGCCTCCGCGGCCTGG 1579894 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||| || ||| || || | ||||||||| ||||| || ||| || ||||| Sbjct 1579895 ACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGCAGCGAAG 1579954 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAG-CGACAC--CCAGTGG 869809 || || |||||||| ||| ||||| ||||| |||||| |||| || ||||| | Sbjct 1579955 AAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTCGTTGAGGCGGTTGTTCCAGTCG 1580014 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | ||| | || |||| |||||| || ||||||| |||||||| ||||||||| Sbjct 1580015 TGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCAGAAGGAGGCCTCAGCCTTTTTG 1580074 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCG 869916 ||||||| ||| | || ||||| |||| ||||||||||| ||||| Sbjct 1580075 TACATCTGCCAGATTTCGTGGTATTGGATGGGGAAGAGGACGAAGCG 1580121 Score = 149 bits (164), Expect = 8e-30 Identities = 206/285 (72%), Gaps = 5/285 (2%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||||| | ||||| ||| | |||||||||||| || ||||||||| Sbjct 1581900 CCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAGGCCGGGCATTAGCCCGCGCTTC 1581841 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 |||| ||| ||||||| | ||| || ||||| ||||| |||||||||||||| ||| Sbjct 1581840 TTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAG 1581781 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 | | ||||||||| || || | || ||| | ||||| | |||||| Sbjct 1581780 GCAACGAGCCGCTCAGCGAA---CACTGAGCGCTCGTCAGATATCCAGCGGAGTGCCCAG 1581724 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGG-TGGTCCTTTTC 869418 || ||||| ||| | | | || | || ||||||||| |||||| ||| | || Sbjct 1581723 TCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTCGAAGAGGAAGGTAC-GCTC 1581665 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||| || ||||||| |||||||| || ||||| ||||||||||| Sbjct 1581664 GGCGGGATCCTTGATGTAGGTGTCAATGAGGAGGGAATAGGTCTC 1581620 Score = 147 bits (162), Expect = 3e-29 Identities = 146/187 (78%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||||| |||||| |||||| |||||| ||||| |||||||||| |||||||||| Sbjct 1579187 GCCTTGGAGTACTCCGATACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGGAGCGAGATC 1579246 Query 868751 AACTCCATCCACGGGAACGGGTT--GGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACG 868808 | ||||| | ||| ||||| | || | ||||| ||| ||| ||||| | Sbjct 1579247 ATGTCCATGAAGTCGAAGGGGTTCGTGACGCC--GTAGTACTTCTCGTCACCGAGGGCAA 1579304 Query 868809 CGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA 868868 |||| || ||||||||||| ||||||||||||||||||||||| || ||||||||||| Sbjct 1579305 CGAGTAGACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGA 1579364 Query 868869 TGAGCGC 868875 ||||||| Sbjct 1579365 TGAGCGC 1579371 Score = 141 bits (156), Expect = 1e-27 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||| | || |||||| ||||||| |||||| ||||| |||||||| | ||||| || Sbjct 1582276 CGCCATAGCATACTCGGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCTTGCAGCGATAT 1582217 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC 868809 || ||||| | ||||||||| | || ||||||||||| || ||| |||| | Sbjct 1582216 CATGTCCATGAAGTCGAACGGGTTCGTCGCGTTGTAGTGCTTGTCATTTCCAAGCGCGAC 1582157 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 ||||| |||||||| || ||||||||||| || ||||| | |||||||||||| || Sbjct 1582156 CAGCAGTCGGTCGGCCACGAACTCGATGTATTGACACATCAACTGGGCGTTCATGCCTAT 1582097 Query 868870 GAGCGCCACCGGCAGCGACTC 868890 ||||| ||||| || | ||| Sbjct 1582096 GAGCGATACCGGTAGAGCCTC 1582076 >seq62 Length=3011317 Score = 109 bits (120), Expect = 7e-18 Identities = 113/147 (77%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111 ||||||||| || || || ||||| ||||||||| || | |||||||||||||| Sbjct 2171927 CATCGGCGGTACAGTCACTTGCGTTATTCGCAACGTCCCCTCCGGCCTCGGCGAGCCCGT 2171868 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 || |||||| ||||||| ||||| ||||| ||||| || ||||| ||||| |||| Sbjct 2171867 TTTCGACAAGCTCGAGGCGAAGCTCGGGCACGCGATGCTCTCCATCCCAGCCACGAAGGC 2171808 Query 19172 ATTCGAGATTGGCAGCGGGTTTGCGGG 19198 |||||| || ||| |||| || |||| Sbjct 2171807 ATTCGAAATCGGC-TCGGGCTTCCGGG 2171782 Score = 89.7 bits (98), Expect = 6e-12 Identities = 254/385 (66%), Gaps = 12/385 (3%) Strand=Plus/Plus Query 508914 TCTTCAACATCACCCAGATGTGCGGCTGCGTGGGCCAGCAGAGCAATGAGGGCCAGCGCA 508973 || |||||||| | ||||||| || ||| || ||||||||| |||||| |||||| Sbjct 2108289 TCATCAACATCTCGCAGATGTCCGTCTGTGTCGGCCAGCAGTCGGTGGAGGGCAAGCGCA 2108348 Query 508974 TCCACTCCGAGT-CGGGCTCGCGCACCCTGGGCTGC--TACCGGCACGCCGAGGCCGTGC 509030 ||| || || | | | | | |||||||| | || | | | | | ||| | | Sbjct 2108349 TCCCCTTCGGTTTCCGTCAC-CGCACCCTC--CCGCATTTCACGAAGGACGA---CTT-- 2108400 Query 509031 CGCCGCCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCG 509090 | || || || ||||||||| || || ||||| || ||||| | | | | Sbjct 2108401 CTCC-CCTGAAGCCCGCGGCTTCGTCGAGAATTCGTATCTCCGTGGCCTGACGCCCCAGG 2108459 Query 509091 AGATGTTTCTGCACATGATCGGCGGGCGCGAGGGCCTCGTCGACACGGCCGTCAAGACGG 509150 || | || | ||| || | || || ||||| ||| |||| || || |||||||| | Sbjct 2108460 AGTTCTTCTTCCACGCCATGGCTGGTCGTGAGGGTCTCATCGATACTGCTGTCAAGACCG 2108519 Query 509151 CCGAGACGGGCTACATCCAGCGCCGGTGCATCAAGTCGATGGAGAGCCTGCAGATCAAGC 509210 |||||||||| ||||||||||| || | ||||| || | ||| | ||| || Sbjct 2108520 CCGAGACGGGTTACATCCAGCGTCGTCTCGTCAAGGCGCTCGAGGATGTCCAGGTCTGCT 2108579 Query 509211 GCGGCGGCCTCGTGCGCAACGCCAACGGCGACATCGTCCAGTTTGCCTATGGCGGCGACG 509270 || |||| ||| |||||| || ||||| || |||| |||| ||| || | || | Sbjct 2108580 ACGACGGCACCGTCCGCAACTCCCTGGGCGATCTCATCCAATTTGTCTACGGAGAGGATG 2108639 Query 509271 GNNNNNNCGCCACCTACATCGAGCG 509295 | || | | ||||||||||| Sbjct 2108640 GTATGGACGGCGCGTACATCGAGCG 2108664 >seq1 Length=3841264 Score = 109 bits (120), Expect = 7e-18 Identities = 155/217 (71%), Gaps = 6/217 (3%) Strand=Plus/Plus Query 1627789 TGGTAGACCGTCTCAAAGATGGCCCGGTTGAGGCGCCGCGCGCCGGCGCTCTCCCACGGC 1627848 ||||| | |||||| ||||| ||||||| | ||| || |||| || ||||| Sbjct 3253484 TGGTAAATCGTCTCGAAGATCTGAAGGTTGAGCCTCCGTGCTTCGGCCGAGTCAAACGGC 3253543 Query 1627849 AGGTCCAT---CATGGCAAACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGG 1627905 | | | |||| ||| |||| |||||||||||||| || ||||| ||||| || Sbjct 3253544 AAGCGGAGGGCCATG---AACGCGTCAGCGAGGCCCTGCACACCAACGCCGATCGGGCGA 3253600 Query 1627906 TGGCGCAGGTTCGAGTGGCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGG 1627965 || |||| ||| ||| | |||||||| || | || |||| ||| ||||||| | |||| Sbjct 3253601 TGACGCATGTTGGAGCGACGGGCCTCCGGGATGGGATAGTAGTTCTTGTCGATGATGCGG 3253660 Query 1627966 TTGAGGTTGCCCACCACGACCTGGACGATCTCGTGCA 1628002 ||||||||| | ||||||| ||| ||||||| Sbjct 3253661 TTGAGGTTGAAGGCGACGACCTTCGCGACGTCGTGCA 3253697 Score = 86.0 bits (94), Expect = 8e-11 Identities = 215/327 (66%), Gaps = 15/327 (5%) Strand=Plus/Plus Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242 || || |||||||| | ||| ||| | ||||| | ||||| ||| ||| || ||| Sbjct 3254498 CCAATACCGCCGGCAGTTTTGCTGATCATGGCGCAGTCCTTGAGGGTGGAGTAAATCCCC 3254557 Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302 ||||| |||||| |||||||| || | ||||| || | || ||||| | || Sbjct 3254558 TCGATGGAGTCGTCCTTCATGCAAACTAAGAAGCATGAGCTCATCTGAGGGTGAGGAGTA 3254617 Query 1630303 CCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAG 1630362 |||||||||||||| || || | || ||||| | || |||||| || |||| Sbjct 3254618 CCGGCGTTGAAGAGGGTAGGTGAAGCGTGTGTGAAGTAACGCTCTGACATGAGGTGGTAG 3254677 Query 1630363 GTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCG 1630422 || | ||||| ||| | | ||||| ||| || ||| |||| ||| Sbjct 3254678 GTCTCAAGCACCCGCTCGATGTCATCG-CCATGT----------ATA----CCGACTGCG 3254722 Query 1630423 ACGCGCATGAGCATGTACTGGGGCCGCTCGACGACGACGCCGCGCACCTTGGTCAGGTAG 1630482 || |||||||| | || || |||||||| | ||| |||| | ||| |||||| Sbjct 3254723 ACACGCATGAGTAGGTGTTGTGGCCGCTCTGCTACGCGGCCGTTGAGCTTCAGCAGGTAT 3254782 Query 1630483 GACCGGCGCATGGTCATGAGGCCAAAG 1630509 || || || ||| ||| |||||| Sbjct 3254783 GAACGCTCCAGCGTCTTGAAACCAAAG 3254809 >seq66 Length=472763 Score = 96.9 bits (106), Expect = 4e-14 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||||| |||| || |||| ||||||||||| || ||||| | || | ||||| | Sbjct 267014 GCCTCGGTCGCGATACGCTCGAAGATGTCGTTGACGAAGGAGTTGAGGATGGCCATCGCC 266955 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||||||||| || ||| |||||||||||||||||||| Sbjct 266954 TTGTTGGAGATACCAGTGTCAGGGTGCACCTGCTTGAGCAC 266914 Score = 93.3 bits (102), Expect = 5e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1254438 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGAC 1254497 |||||||| ||||||| || | || ||||| || |||||||| | || | ||||| | Sbjct 280785 GCCTCGGTCGCGATGCGCTCAAAGATATCGTTCACGAACGAGTTGAGGATGGCCATCGCC 280844 Query 1254498 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 ||||| ||||| ||| ||||||||||||||||||||||| Sbjct 280845 TTGTTCGAGATACCCGTATCGGGGTGCACCTGCTTGAGCAC 280885 >seq73 Length=2658327 Score = 89.7 bits (98), Expect = 6e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1254437 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGA 1254496 |||||| || ||||||| |||| ||||||||||| || ||||| | || | ||||| Sbjct 1668532 GGCCTCCGTCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTGAGGATGGCCATCGC 1668473 Query 1254497 CTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1254538 |||||| ||||| || ||||||||| ||||||||||| || Sbjct 1668472 CTTGTTCGAGATACCGGTGTCGGGGTGGACCTGCTTGAGGAC 1668431 >seq13 Length=1377620 Score = 89.7 bits (98), Expect = 6e-12 Identities = 119/163 (73%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 1349473 ATCGTGCACCGCGACCTCAAGAGCGGCAACCTGCTGGTCGACCAAAACTACAACGTCAAG 1349532 ||||||||||| || |||||| || ||| ||||| | ||| | || ||||||||| Sbjct 71193 ATCGTGCACCGAGATCTCAAGCCCGAGAACGTGCTGCTGGACGACGACCTGAACGTCAAG 71252 Query 1349533 GTGGCCGACTTTGGCCTGGCG--CG-CATTAAGGAGGACAACGCCACGATGACCCGCTGC 1349589 | || |||||||||||| || || || ||||| | | || | | |||| ||||| Sbjct 71253 ATCGCGGACTTTGGCCTGTCGAACGAAATCAAGGACGGCGACTTCCTCAAGACCAGCTGC 71312 Query 1349590 GGCACGCCCTGCTGGACGGCGCCCGAGGTCATACGCGGCGAGC 1349632 |||| ||| || | |||||||||||||| ||||||| || Sbjct 71313 GGCAGCCCCAACTACGCCGCGCCCGAGGTCATCCGCGGCGGGC 71355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107127875073746