Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq51 203 5e-46 seq1 109 9e-18 seq66 96.9 5e-14 seq73 89.7 8e-12 >seq51 Length=3165537 Score = 203 bits (224), Expect = 5e-46 Identities = 249/334 (75%), Gaps = 16/334 (5%) Strand=Plus/Plus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| ||| ||| |||| ||||||||| ||||| Sbjct 1579553 ACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTGAGACCGG-CATGAGGCCACGCTT 1579611 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| ||||| ||||||| ||| ||||||||| ||||| ||||||||||||||||| Sbjct 1579612 CTTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGATACCCTCGACGGCGGCAAA 1579671 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGT---TGATCCACTTCATCGC 794516 | ||||||| ||||| ||||| | || |||| |||| ||||||| | || Sbjct 1579672 GGCGACGAGACGCTCCGCAAAGG----CA--ACCTCCTTGTCGCTGATCCAACGAAGAGC 1579725 Query 794517 CCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC--- 794573 ||| || ||||| ||| | | | || | |||||| ||||| ||||||| || Sbjct 1579726 CCAGTCGGCCTTCTTCTTGATGCAAGGGATCGTGTCAATGGCATCGAAGAGGTATTCGCG 1579785 Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633 || || || |||||||||| |||||||||||||||||| ||||||||||| ||||| || Sbjct 1579786 CTGCT-GA--GGGTCCTTGATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCGGAGTGAAT 1579842 Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 ||| || || ||| ||||| || || |||||| Sbjct 1579843 GTTCTCCATCATGATTTGGAAACCGTAGAAGCAG 1579876 Score = 185 bits (204), Expect = 1e-40 Identities = 241/329 (73%), Gaps = 7/329 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| | ||||| ||| |||||||||||| || ||||||||| Sbjct 1581900 CCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTGAGGCCGGGCATTAGCCCGCGCTTC 1581841 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||| ||| ||||||| ||| || ||||| ||||| |||||||||||||| ||| Sbjct 1581840 TTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAGAAGATACCCTCGACGGCGGCGAAG 1581781 Query 794461 CCGACGAGCCGCTCGGC-AAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | ||||||||||| || || | || || ||| | ||||| | ||||| Sbjct 1581780 GCAACGAGCCGCTCAGCGAACACTG----AGCGCTCGTCAGATATCCAGCGGAGTGCCCA 1581725 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGG-TGGTCCTTCT 794578 |||||||| ||| | | | || | || ||||||||| |||||| ||| | || Sbjct 1581724 GTCTGCCTTCTTCTTGATGCATGGGATGGTCTCGATGGCGTCGAAGAGGAAGGTAC-GCT 1581666 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 || | || ||||||| ||||||||| |||||||| || |||||||| ||||| | ||||| Sbjct 1581665 CGGCGGGATCCTTGATGTAGGTGTCAATGAGGAGGGAATAGGTCTCAGAGTGCACGTTTT 1581606 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||| ||||| ||||| || |||||| Sbjct 1581605 CGATCATTATCTGAAAGCCGTAGAAGCAG 1581577 Score = 143 bits (158), Expect = 4e-28 Identities = 150/195 (77%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||||| ||||| |||||| |||||| ||||| |||||||||| || Sbjct 1579179 TGACACCGGCCTTGGAGTACTCCGATACGCGCTTCTCGAAGAAGTTCGTCTTGCCCTGGA 1579238 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTT--GGCCGTCAGGTAGTGCTTCTCGCACCC 794008 ||||||||| ||||| | ||| ||||| | || | ||||| ||||||| || Sbjct 1579239 GCGAGATCATGTCCATGAAGTCGAAGGGGTTCGTGACGCC--GTAGTACTTCTCGTCACC 1579296 Query 794009 GAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTT 794068 ||| | | || || |||||||||||||| || ||||||||||||||||| || ||| Sbjct 1579297 GAGGGCAACGAGTAGACGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTT 1579356 Query 794069 CATGCCGATGAGCGC 794083 ||||||||||||||| Sbjct 1579357 CATGCCGATGAGCGC 1579371 Score = 131 bits (144), Expect = 3e-24 Identities = 169/231 (73%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 796162 TGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGTCGCTGGCGGCG 796221 |||||||| || ||| || || | |||||||| ||||| || ||| || ||| Sbjct 1579892 TGGACCTCGTTGGAGAAACGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGCAGCG 1579951 Query 796222 AAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG-CGA--GACCCAG 796278 || |||||||||||||| ||| ||||||||||| |||||| |||| || | |||| Sbjct 1579952 AAGAAGGCGAGGACGTGGGAGATGAAGTGACGCTCATCGTCGTTGAGGCGGTTGTTCCAG 1580011 Query 796279 TGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTT 796338 | | ||| | || || | |||||| || ||||| ||||||||||| |||||| Sbjct 1580012 TCGTGGAGGTCCTTGGACAGATCCATCTCCTCCGCCGTCCAGAAGGAGGCCTCAGCCTTT 1580071 Query 796339 TTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 |||||||||| ||| || ||||| |||||||||| || || |||||| Sbjct 1580072 TTGTACATCTGCCAGATTTCGTGGTATTGGATGGGGAAGAGGACGAAGCGA 1580122 Score = 131 bits (144), Expect = 3e-24 Identities = 153/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 || ||||||| | ||||||||| ||||||| |||||| ||||| |||||||| | || Sbjct 1582282 GAAGCCCGCCATAGCATACTCGGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCTTGCAG 1582223 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 ||| |||| ||||| | ||||||||| | || ||||||||| || || || Sbjct 1582222 CGATATCATGTCCATGAAGTCGAACGGGTTCGTCGCGTTGTAGTGCTTGTCATTTCCAAG 1582163 Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 || | ||||| |||||||| ||||| || ||||| || ||||| | ||||||||| Sbjct 1582162 CGCGACCAGCAGTCGGTCGGCCACGAACTCGATGTATTGACACATCAACTGGGCGTTCAT 1582103 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTC 794098 ||| ||||||| || || || | ||| Sbjct 1582102 GCCTATGAGCGATACCGGTAGAGCCTC 1582076 >seq1 Length=3841264 Score = 109 bits (120), Expect = 9e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCGCGCCGGCGCTCTCC 2070111 || |||||||| |||||||| ||||| ||||||| | || || |||| || Sbjct 3253478 GCAGCATGGTAAATCGTCTCGAAGATCTGAAGGTTGAGCCTCCGTGCTTCGGCCGAGTCA 3253537 Query 2070112 CACGGCAGGTCCAT---CATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATC 2070168 |||||| | | |||| |||||||| || ||||||||||| || ||||| ||| Sbjct 3253538 AACGGCAAGCGGAGGGCCATG---AACGCGTCAGCGAGGCCCTGCACACCAACGCCGATC 3253594 Query 2070169 GGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATC 2070228 || || || |||| ||| ||| | |||||||| || | || |||| ||| ||||||| Sbjct 3253595 GGGCGATGACGCATGTTGGAGCGACGGGCCTCCGGGATGGGATAGTAGTTCTTGTCGATG 3253654 Query 2070229 ACGCGGTTGAGGTTG 2070243 | ||||||||||||| Sbjct 3253655 ATGCGGTTGAGGTTG 3253669 >seq66 Length=472763 Score = 96.9 bits (106), Expect = 5e-14 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 |||||||| |||| || |||| ||||||||||| || ||||| | ||| | ||||| Sbjct 267014 GCCTCGGTCGCGATACGCTCGAAGATGTCGTTGACGAAGGAGTTGAGGATGGCCATCGCC 266955 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||||| || ||| |||||||||||||||||||| Sbjct 266954 TTGTTGGAGATACCAGTGTCAGGGTGCACCTGCTTGAGCAC 266914 Score = 93.3 bits (102), Expect = 7e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 |||||||| ||||||| || | || ||||| || |||||||| | ||| | ||||| Sbjct 280785 GCCTCGGTCGCGATGCGCTCAAAGATATCGTTCACGAACGAGTTGAGGATGGCCATCGCC 280844 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||||| ||| ||||||||||||||||||||||| Sbjct 280845 TTGTTCGAGATACCCGTATCGGGGTGCACCTGCTTGAGCAC 280885 >seq73 Length=2658327 Score = 89.7 bits (98), Expect = 8e-12 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1485603 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGA 1485662 |||||| || ||||||| |||| ||||||||||| || ||||| | ||| | ||||| Sbjct 1668532 GGCCTCCGTCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTGAGGATGGCCATCGC 1668473 Query 1485663 TTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||| ||||| || ||||||||| ||||||||||| || Sbjct 1668472 CTTGTTCGAGATACCGGTGTCGGGGTGGACCTGCTTGAGGAC 1668431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916231720310582