Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2 105 5e-18 >seq2 Length=1429897 Score = 105 bits (116), Expect = 5e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 |||||| || || || || |||||||| || || | | ||||| ||| || ||||| Sbjct 256981 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTG 256922 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 || || ||| | ||||| | ||||| ||||| ||||||||||| || || || ||| | Sbjct 256921 CTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTG-AATCT 256863 Query 29703 TTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAG 29761 ||| ||||| | || | ||||| ||| || || || ||||| || || ||||| | Sbjct 256862 TTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGG 256803 Query 29762 TTAAGGTTTTAACAAATATCTGCAT 29786 | | || || ||||| |||||||| Sbjct 256802 TCAGAGTCTTGACAAAGATCTGCAT 256778 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 29596 TCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATAT 29655 || || || ||||||||||||| | ||||| ||| ||||| || ||||| || | Sbjct 257248 TCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAG 257189 Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT 29715 || | | ||||||||||| || |||||||| ||||| || | || || || | Sbjct 257188 ATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACGTTA 257129 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | |||||||| || || || || || ||||| || || || | ||| || || Sbjct 257128 TCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTCTTCCCCGTGAGGGTCTTGACG 257069 Query 29776 AATATCTGCATT 29787 || ||||||||| Sbjct 257068 AAAATCTGCATT 257057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385218552109458