Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq62 132 9e-26 seq2 116 7e-21 >seq62 Length=3011317 Score = 132 bits (146), Expect = 9e-26 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 82620 TCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAG 82679 |||||||| || || ||||| || || | | ||||| || || || || || || ||| Sbjct 734777 TCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAAG 734836 Query 82680 ATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTT 82739 || || | ||||| ||||| || || || |||||||| |||||||| || || || || Sbjct 734837 ATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTTCGCCTTCACGTTG 734896 Query 82740 TCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACA 82799 || ||||| || || ||| || ||||| || ||||||||||| || | |||||| || Sbjct 734897 TCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCCGTGAGCGTCTTCACG 734956 Query 82800 AATATCTGCAT 82810 ||||||||||| Sbjct 734957 AATATCTGCAT 734967 Score = 109 bits (120), Expect = 1e-18 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| || || || || ||||| || || || || || | | | ||| || || ||||| Sbjct 735328 GTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGACCATCCTCCAGTTG 735387 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || || || ||||| || | ||| || || || || || || ||||| ||||||||||| Sbjct 735388 CTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGAATGCCCTCCTTGTCTTGAATCTT 735447 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || || || || || ||||| | || || || | || || |||||||| || Sbjct 735448 CGCCTTGACGTTGTCGATGGTATCCGACGACTCGACCTCGAGGGTGATAGTCTTGCCCGT 735507 Query 82787 CAACGTCTTTACAAATATCTGCATT 82811 ||||||||| || || ||||||||| Sbjct 735508 CAACGTCTTGACGAAGATCTGCATT 735532 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 || ||||||||||||||||| || || ||||| |||||||| ||| | || || ||| Sbjct 735144 CCCTCCTTATCTTGAATCTTGGCCTTCACATTGTCAATCGTGTCAGAGGACTCGACCTCC 735203 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || |||||||| || | ||||||||| || || ||||| Sbjct 735204 AGCGTGATTGTCTTGCCAGTAAGCGTCTTTACGAAGATTTGCAT 735247 >seq2 Length=1429897 Score = 116 bits (128), Expect = 7e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||| || || || || ||||| || || || || || ||| | | |||||| || || || Sbjct 256700 GTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACCGTCCTCGAGCTG 256641 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || ||||| ||||| || | || || || || || || || ||||| || || ||||| Sbjct 256640 CTTGCCAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTT 256581 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 ||||| || || ||||| ||||| | || || || | || ||||||||||| || Sbjct 256580 GGCTTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCAGT 256521 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 || ||||| ||||| |||||||| Sbjct 256520 CAGAGTCTTGACAAAGATCTGCAT 256497 Score = 109 bits (120), Expect = 1e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || ||||| || || || || || || | | || || || ||||| Sbjct 256980 TGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTGC 256921 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| | | || || || || || || || |||||||| ||||||||| Sbjct 256920 TTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTTT 256861 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || || || || || || || || || || || | ||| ||||||||||| ||| Sbjct 256860 GCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTC 256801 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| ||||| |||||||| Sbjct 256800 AGAGTCTTGACAAAGATCTGCAT 256778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825464006782