Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 seq51 114 1e-20 seq62 98.7 1e-15 seq1 95.1 1e-14 seq13 89.7 5e-13 seq35 86.0 6e-12 >seq2 Length=1429897 Score = 138 bits (152), Expect = 1e-27 Identities = 154/203 (76%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| ||| | ||| ||| ||||||||||||||||| Sbjct 256694 GGTTGACTCCTTCTGAATGTTGTAGTCGGAAAGAGTGCGACC-GTCCTCGAGCTGCTTGC 256636 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| ||||||||||| || |||||||| |||||||| |||||| | Sbjct 256635 CAGCGAAGATGAGGCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCTT 256576 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | |||| || || | || ||| || |||| ||||| || ||||| ||||||| Sbjct 256575 TGACGTTGTCAATGGTATCCGAGGACTCGACCTCGAGGGTGATCGTCTTGCCAGTCAGAG 256516 Query 133642 TTTTTACGAAAATCTGCATGGCT 133664 | || || || ||||||||| || Sbjct 256515 TCTTGACAAAGATCTGCATGCCT 256493 Score = 118 bits (130), Expect = 1e-21 Identities = 153/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| ||||| || ||||| ||| || |||| | | | ||||| || | Sbjct 256981 ATGAAGGGTCGACTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCA-TCCTCCAGTT 256923 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| ||||| | || | |||||||||||| || || || || ||||| || |||| Sbjct 256922 GCTTACCCGCAAAGATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCT 256863 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 || ||||| | || | ||||| | | |||||| |||| |||| || ||||||| Sbjct 256862 TTGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGG 256803 Query 133636 TCAGAGTTTTTACGAAAATCTGCATGGCT 133664 ||||||| || || || ||||||||| || Sbjct 256802 TCAGAGTCTTGACAAAGATCTGCATGCCT 256774 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || || ||||| | |||| | | | |||||||||||||||| Sbjct 257255 GGTGCTCTCCTTCTGGATGTTATAATCCGAGAGCGTGCGGCCA-TCCTCGAGCTGCTTGC 257197 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 ||||| | ||||| |||||||| || || ||||| || |||||||| |||||| || Sbjct 257196 CCGCGAAGATGAGACGCTGCTGATCCGGGGGGATACCCTCCTTGTCCTGGATCTTCGCCT 257137 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||| | | ||| || || | |||| || || || || || | Sbjct 257136 TCACGTTATCGATCGTGTCAGACGACTCGACCTCCAGCGTGATAGTCTTCCCCGTGAGGG 257077 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 257076 TCTTGACGAAAATCTGCAT 257058 >seq51 Length=3165537 Score = 114 bits (126), Expect = 1e-20 Identities = 154/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 120639 CAGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGT 120698 || |||||||||||||||||||| |||||||| || || || ||||||||| || || Sbjct 1579529 CAAGCACGCAAAGTCCGTGTGCATACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGT 1579588 Query 120699 CAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAA 120758 || || ||||||| ||| | |||| | |||| |||| ||| || |||||| || Sbjct 1579589 GAGACC-GGCATGAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAACGAGCCCGAGAA 1579647 Query 120759 GAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCT 120818 ||| | ||||| ||| |||||||||||| | ||||| || || | || |||| Sbjct 1579648 GAAGATACCCTCGACGGCGGCAAAGGCGACGAGACGCTCCGCAAAGGCAACCTCCTTGTC 1579707 Query 120819 GTCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851 | |||||| | ||||| |||||||| || Sbjct 1579708 GCTGATCCAACGAAGAGCCCAGTCGGCCTTCTT 1579740 Score = 98.7 bits (108), Expect = 1e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 120355 TACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATA 120414 |||||| ||||| ||||| || ||||| || ||||| | || ||| || ||| ||| Sbjct 1582266 TACTCGGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCTTGCAGCGATATCATGTCCATG 1582207 Query 120415 AACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGG 120474 || ||||||||||| ||||||| ||| || | || | | || ||||||||| Sbjct 1582206 AAGTCGAACGGGTTCGTCGCGTTGTAGTGCTTGTCATTTCCAAGCGCGACCAGCAGTCGG 1582147 Query 120475 TCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCC 120521 || || || ||||| ||||| | ||||| |||| ||||||||||| Sbjct 1582146 TCGGCCACGAACTCGATGTATTGACACATCAACTGGGCGTTCATGCC 1582100 Score = 86.0 bits (94), Expect = 6e-12 Identities = 118/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 || || || ||||| ||||||| ||||||||||| || |||||||| ||| || Sbjct 1581924 AGACAGGCGAAGTCAGTGTGCATCCCCTCGTCGCGGCTGATGAGCTCGTTCGAAAATGTG 1581865 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 ||||||||||| | || | ||||||| |||| |||| ||| || || || ||| Sbjct 1581864 AGGCCGGGCATTAGCCCGCGCTTCTTGATCCAGAAGATGGAGGCGAATGAACCAGAGAAG 1581805 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAAC 120804 || | ||||| ||| ||| ||||| || | ||||| || ||| Sbjct 1581804 AAGATACCCTCGACGGCGGCGAAGGCAACGAGCCGCTCAGCGAAC 1581760 >seq62 Length=3011317 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||||||||| || |||||||| | |||| | |||||| ||||||||||||||| | Sbjct 734776 CTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTGCTTGCCCGCGAA 734835 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||||| ||||| ||||| || || || || ||||| || ||||| ||| | | Sbjct 734836 GATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTTCGCCTTCACGTT 734895 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 || | |||||| | | || || || | |||| || ||||| || || || || || Sbjct 734896 GTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCCGTGAGCGTCTTCAC 734955 Query 133649 GAAAATCTGCAT 133660 ||| |||||||| Sbjct 734956 GAATATCTGCAT 734967 >seq1 Length=3841264 Score = 95.1 bits (104), Expect = 1e-14 Identities = 194/285 (68%), Gaps = 4/285 (1%) Strand=Plus/Plus Query 149398 CTCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCC-GTACTTTGA-GATGGCCGCGCA 149455 |||| | ||||| | ||||| || || |||||| | || |||| ||| ||||| Sbjct 3254475 CTCGGATGTTGTGGATGTTGAGACCAATACCGCCGGCAGT--TTTGCTGATCATGGCGCA 3254532 Query 149456 GTCGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCA 149515 ||| ||| || ||||| || ||||||||| |||| ||||||| | | ||||| Sbjct 3254533 GTCCTTGAGGGTGGAGTAAATCCCCTCGATGGAGTCGTCCTTCATGCAAACTAAGAAGCA 3254592 Query 149516 CGAGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAA 149575 |||| ||| || || | | || ||||| ||| | ||| || |||||||| || Sbjct 3254593 TGAGCTCATCTGAGGGTGAGGAGTACCGGCGTTGAAGAGGGTAGGTGAAGCGTGTGTGAA 3254652 Query 149576 ATATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGAT 149635 || || ||| | | ||| | ||| ||||| || || |||||||||||||| || Sbjct 3254653 GTAACGCTCTGACATGAGGTGGTAGGTCTCAAGCACCCGCTCGATGTCATCGCCATGTAT 3254712 Query 149636 GCCTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCAC 149680 || | ||||| ||||| || | || || || ||||| || || Sbjct 3254713 ACCGACTGCGACACGCATGAGTAGGTGTTGTGGCCGCTCTGCTAC 3254757 >seq13 Length=1377620 Score = 89.7 bits (98), Expect = 5e-13 Identities = 79/97 (81%), Gaps = 4/97 (4%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || ||||| |||| | ||| ||| |||||| ||||||||| Sbjct 90794 GGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGCGT--ACGGCCGTCCTCAAGCTGCTTG 90851 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 || ||| |||| || |||||||||||||| ||||||| Sbjct 90852 CCGGCGAAAATCAGGCGCTGCTGGTCGGGGGGGATGC 90888 >seq35 Length=1232546 Score = 86.0 bits (94), Expect = 6e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || ||||| |||| | |||| |||||||||||||||||| Sbjct 1141404 GGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGCGTGCGGCCGTCCTCGAGCTGCTTGCC 1141345 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 |||| | || || |||||||| ||||| ||||||| Sbjct 1141344 CGCGAAGATCAGGCGCTGCTGATCGGGGGGGATGC 1141310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419966099120