Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Polyporus_20brumalis_20[genbank_20GCA_5F001792895.1_202016-10-20] 138 sequences; 53,434,618 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq62 105 4e-18 seq2 93.3 3e-14 >seq62 Length=3011317 Score = 105 bits (116), Expect = 4e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || ||||||||||| || ||||||||||| ||||| ||||| |||| |||| || Sbjct 734764 ATGAAGCGTGCTCTCTTTCTGGATGTTGTAATCCGAGAGCGTGCGCCCGTCCTCCAGCTG 734823 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || || || || || | ||||| || ||| |||| | ||| || || || ||| || Sbjct 734824 CTTGCCCGCGAAGATGAGGCGCTGTTGGTCTGGCGGAATACCCTCCTTATCCTGAATCTT 734883 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | ||| || | ||| | ||||| ||||| || || | ||||||||| || || | Sbjct 734884 CGCCTTC-ACGTTGTCGATCGTGTCCGAAGATTCGACCTCCAACGTGATCGTCTTGCCCG 734942 Query 33725 TTAACGTTTTTACAAAGATCTGCAT 33749 | | ||| || || || |||||||| Sbjct 734943 TGAGCGTCTTCACGAATATCTGCAT 734967 >seq2 Length=1429897 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| ||||| || ||||| | || |||| ||| || || ||||| Sbjct 256969 CTCCTTCTGAATGTTGTAGTCGGACAGCGTGCGGCCATCCTCCAGTTGCTTACCCGCAAA 256910 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||||| |||||||| || | || | ||| || || || ||| || || | || | Sbjct 256909 GATCAACCGCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGAATCTT-TGCCTTGACGT 256851 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | |||||| || ||||| || | |||||||| || || || | || || | Sbjct 256850 TGTCGATGGTGTCCGAAGACTCCACCTCGAGAGTGATCGTCTTGCCGGTCAGAGTCTTGA 256791 Query 33737 CAAAGATCTGCAT 33749 ||||||||||||| Sbjct 256790 CAAAGATCTGCAT 256778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703447160960